| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4388 |
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| Symbol | |
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| ID | 8227991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5300583 |
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| End bp | 5303180 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932235 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_003088755 |
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| Protein GI | 255038134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.21265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAG TGAAAAATTT GAATAAATCA TTAGCACATC TCAAAGGTCT TTCTGCATTA
ATCCTTTTGT GCTGCTGCTT TTCGGTACAG GCGCAGCGTG TAGGCCTTGG CGGCGCGAAA
CCGGCCGCCG CCCCGACCAA CCTCGGCATC GACCCGGCCA ATCCCAAAGA ATACACGATC
GCGGAAGTGA CCGTTTCGGG TACGCAGTTC CTTGATCCCA ACTCGATGAT CTCCATTTCC
GGCCTCAAAC CCGGCGACAA GATCCGCATT CCGGGGCCGG CTGTGACGTC GTCTATCAAA
AAAATGATGG ATTTCGGAAC GCTGGACGAT GTCGAGATCA TGGCTACCAA AATCGAAGGC
GAAAAAGTAT GGTTGAACAT CCATATCAAG GAGCGTCCGC GGCTTTACAA GGTATCTTTC
ACGGGTATCC GCAAAGGCGA GCGCGAAACG CTGAACGACA AGGTGAAGCT TATCAAAGGC
CGCGTGATCA CGCCGACGAT CATTAAAAAC ACGCAGCTGG TTATCAAGAA GTATTATCAG
GACAAGGGTT TTTATAATAC AAAGGTAAAA GTCCTTCAGA TCCCCGATTC GACCCGCGGC
CAGGCTACTT TGAATTTTGC TATTACAAAG GGCAAAAAGG TTAAGATCCA AAAAATCAAT
ATCGAAGGAA ATACGGCTAT CAGCGACAAA ACGCTGAAAC GCAAAATGAA AGGCACGAAG
CAGCGTCGCA TCGGCCGCCT TTTTAACCCT TCGAAATACA TTCCTAAAAA ATACGAAGAG
GACAAGGAGA AACTCATCGC TTACTACCGC AAAAACGGTT ACCGCGATGC CGTGATCGAA
TTTGATACCA TTCGGAATGA CGATGAGACG ATCAGCATCG ACATGAAAAT CGAAGAAGGT
CAGAAATACT ATTATCGGAA CATTACGTGG TCGGGTAACT ATTTGTATAC CTCGCAATAC
CTGAGCGATC GCCTCGGAGT GAAGAAGGGC GACGTGTATA ACCCGGAAGA ACTCGATAAG
AAGATCAACG GTATCCCGGG ATCGGACGTG AGCTCGATTT ACATGGACGA CGGTTACCTC
TACTTCCACA TCGAACCGAC CGAAAGAGCC GTTGAAGGCG ACTCGATCGA CGTAGAACTG
CGTATGTTCG AAGGGAAACA GGCGACCATC AACCGCATTC TCCTGAACGG TAACACCAAA
ACCAGCGACC GCGTGGTATT GCGCGAACTC TTCACGTTGC CGGGACAGAA ATTCAGTAAA
ACGGAGATTA TCAACACCCA GCGTCAGCTG TCGCAAATGG GTTATTTCGA TCCTGAAAAG
ATCCAGATCA ACCCGATCCC TAACCAGGCC GACGGTACGG TGGACATTGA ATACACCGTG
GAAGAAAAGC CATCCGACCA GATCGAGCTT TCAGGTGGCT GGGGCGGTTA CATCGGATTC
GTGGGAACGC TTGGATTGGT TTTCAATAAC TTCTCCATTA AAAACATCCC TAACCGCGAA
ACATGGCGCC CATTGCCATC CGGCGACGGG CAGAAGCTTT CGTTGCGCTT CCAGGCCAAC
GGTAAGCAGT ACCAGACTTA TTCGTTGTCG TTCAGCGAAC CGTGGCTAGG CGGTAAAAAG
CCGATCAACT TCGGGGTATC TTTCCAACGT ACGGTTTACC GGATGACCGA CCTTAGCTCT
TATTATGGCT ACAACACGAG TGGCGGCGGC GGACGGGTAA GCTATCGCGG CGGTTACTAC
AACAACGGTA TCACGCTTTC GCTCGGTCGC CGTTTGAAAG AGCCGGACCG CAACCTTGTG
ATGACGCATT CGCTATCTTA CCAGCGTTAC CGTCTCGACA GCCTCGACAT TTTCCGGATT
GGTTACAGCA AGGGAGTTTC AAACAACATT TCGTTTAATA CAACCATTTC GCGGAACACA
TTGAGTGATT TCCAATTCCC GAGAAGCGGT AGTAACATCT CATTAAGCGC CACTTTCACA
CCACCTTATT CGGTGTTCAG AAAGAAAGCG TTTTCAGACA AAACCGATAC TTACCGCTGG
GTTGAATACC ATAAATGGAT GTTCGATGCG AGCTACTACG CAACAATCGT GGGCAAGCTG
GTGCTGAGCA CCCGGGCGCA CATGGGTTTC CTTGGCGCGT ACGGAGACAA GGTAGGTTAC
AGCCCGTTCG GTCGCTTTAT TCTCGGCGGT TCGGGGCTCG CGGGCCAGGG TACATTCTCG
CTGGCTGACC AGGACATTGT CGGTTTGCGT GGTTACCAGG ATCAGAAGGT TGGTCCATTG
GCTGCTAACG GTTATCCGGC GTCGGGTGGT GGTATTGTTT ATAACAAATA TGTGATGGAG
CTCCGGTACC CGGTATCGCT CAACCCACAG GCGACGATCT TCGTGCTCGG TTTTGCGGAA
GGTGGTAACA ACTGGGGTAC TTACAACGAG TTCAATCCAT TCGACTTGAA ACGCTCTGCG
GGCGTAGGCG CGCGGATTTT CATGCCGGCT TTCGGTCTTC TAGGTATCGA CTGGGGTTAT
GGATTCGACA AAATTCAGGG ACAAAATACG AGGAGCGGTC CTCAGTTCCA CTTTACGATC
GGTCAGCAGA TCAGATAA
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| Protein sequence | MNPVKNLNKS LAHLKGLSAL ILLCCCFSVQ AQRVGLGGAK PAAAPTNLGI DPANPKEYTI
AEVTVSGTQF LDPNSMISIS GLKPGDKIRI PGPAVTSSIK KMMDFGTLDD VEIMATKIEG
EKVWLNIHIK ERPRLYKVSF TGIRKGERET LNDKVKLIKG RVITPTIIKN TQLVIKKYYQ
DKGFYNTKVK VLQIPDSTRG QATLNFAITK GKKVKIQKIN IEGNTAISDK TLKRKMKGTK
QRRIGRLFNP SKYIPKKYEE DKEKLIAYYR KNGYRDAVIE FDTIRNDDET ISIDMKIEEG
QKYYYRNITW SGNYLYTSQY LSDRLGVKKG DVYNPEELDK KINGIPGSDV SSIYMDDGYL
YFHIEPTERA VEGDSIDVEL RMFEGKQATI NRILLNGNTK TSDRVVLREL FTLPGQKFSK
TEIINTQRQL SQMGYFDPEK IQINPIPNQA DGTVDIEYTV EEKPSDQIEL SGGWGGYIGF
VGTLGLVFNN FSIKNIPNRE TWRPLPSGDG QKLSLRFQAN GKQYQTYSLS FSEPWLGGKK
PINFGVSFQR TVYRMTDLSS YYGYNTSGGG GRVSYRGGYY NNGITLSLGR RLKEPDRNLV
MTHSLSYQRY RLDSLDIFRI GYSKGVSNNI SFNTTISRNT LSDFQFPRSG SNISLSATFT
PPYSVFRKKA FSDKTDTYRW VEYHKWMFDA SYYATIVGKL VLSTRAHMGF LGAYGDKVGY
SPFGRFILGG SGLAGQGTFS LADQDIVGLR GYQDQKVGPL AANGYPASGG GIVYNKYVME
LRYPVSLNPQ ATIFVLGFAE GGNNWGTYNE FNPFDLKRSA GVGARIFMPA FGLLGIDWGY
GFDKIQGQNT RSGPQFHFTI GQQIR
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