| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4360 |
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| Symbol | rpsE |
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| ID | 8227963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5277843 |
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| End bp | 5278358 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644932207 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_003088727 |
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| Protein GI | 255038106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000388544 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0804567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACAA ATACAAGACC TTCAAAGGTT AACGAATCAG ACCTGAAAGA GCGCGTTGTA
GCGATCAACC GGGTGGCAAA AGTAGTAAAA GGTGGTCGTC GTTTCTCCTT CTCTGCCATC
GTGGTAGTAG GAGACGGAAA CGGAGTTGTA GGTTACGGAT TGGGCAAAGC CAACGAAGTA
ACTGACGCGA TCGCCAAAGG AATTGACGAT GCTAAGAAAA ACCTGATCCA AATTCCGATG
CTTAAACATA CCGTTCCTCA CGAAATGGAA GGTAAGTTCA GCGGTGGTTT CGTTCTGATC
AAGCCGGCTG CTCCTGGTAC GGGAGTACTG GCAGGTGGCC CGATGCGTGC GGTATTGGAA
AGTGCAGGTA TCAAAGACGT ACTTGCGAAA TCCAAAGGTT CATCGAACCC GCACAACGTT
ATCAAGGCTA CAATTGACGC TCTTTTGAAA ATGAGAGCTC CGCATCAGGT TGCTTTCCAA
CGCAGCGTTA AATTGGAAAA AGTATTCAAC GGATAA
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| Protein sequence | MSTNTRPSKV NESDLKERVV AINRVAKVVK GGRRFSFSAI VVVGDGNGVV GYGLGKANEV
TDAIAKGIDD AKKNLIQIPM LKHTVPHEME GKFSGGFVLI KPAAPGTGVL AGGPMRAVLE
SAGIKDVLAK SKGSSNPHNV IKATIDALLK MRAPHQVAFQ RSVKLEKVFN G
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