| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4350 |
|---|
| Symbol | rplP |
|---|
| ID | 8227953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5273753 |
|---|
| End bp | 5274181 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644932197 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_003088717 |
|---|
| Protein GI | 255038096 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000215077 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.124018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAGC CGAAAAGGAC AAAATTTCGC AAACAACAGA AGAACAAAGG TTCGCACCGT
GGTCTGGCGA CCCGCGGACA TGAGATCGCT TTTGGATCGT TTGCAATAAA AGCACTGGAA
CCAGGTTGGT TGACTGCTCG TCAAATCGAA GCAGCACGTA TCTCGGTAAC CCGTGCAATG
AAACGCGAAG GTCAGGTATG GATCCGTGTA TTCCCTGACA AACCGATTAC CAAAAAACCT
GCTGAGGTTC GTATGGGTAA AGGTAAAGGT GCCCCTGAAT ATTGGGTAGC TCCTGTTAAG
CCTGGAACTA TCATTTTCGA AGCGACTGGT GTAGCGCTGG ATACTGCAAA CGAAGCATTG
CGTTTGGCTG CACAAAAGTT GCCAATTAAG ACAAGGTTCG TCGTACGCCG GGATTATCAG
GAAGCATAA
|
|---|
| Protein sequence | MLQPKRTKFR KQQKNKGSHR GLATRGHEIA FGSFAIKALE PGWLTARQIE AARISVTRAM
KREGQVWIRV FPDKPITKKP AEVRMGKGKG APEYWVAPVK PGTIIFEATG VALDTANEAL
RLAAQKLPIK TRFVVRRDYQ EA
|
|---|
| |