Gene Dfer_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4348 
Symbol 
ID8227951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5272487 
End bp5272861 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content50% 
IMG OID644932195 
Productribosomal protein L22 
Protein accessionYP_003088715 
Protein GI255038094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000469697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.116233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAA GAGCTATATT AAAAGACGTG CCTACCTCTC CTCGCAAGAT GAGATTGGTG 
GCCGACATGA TTCGCGGACA GAAGGTCAGC AAAGCGTTGG CACTTTTGAA ATTCCAACCG
AGAGCTTCAT CGCCGGTTTT GCACAAAGTT CTTCTTTCTG CCGTTGCCAA CTGGCAGCAA
CAGAATGAGG GATCGAAACT GGAAGACGCC GACCTGATCG TTAAAACCGT TTTCATCGAC
GGTGGACGCA TGTTGAAGCG TTTGCGCCCT GCACCGCAAG GACGGGCACA CAGAATCCGT
AAGCGTTCCA ACCACATCAC TATCGTGGTA GACGACGCAT CGGTGTCAGT AAATGAAGCA
TCAATCGAAT CATAA
 
Protein sequence
MEARAILKDV PTSPRKMRLV ADMIRGQKVS KALALLKFQP RASSPVLHKV LLSAVANWQQ 
QNEGSKLEDA DLIVKTVFID GGRMLKRLRP APQGRAHRIR KRSNHITIVV DDASVSVNEA
SIES