| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4345 |
|---|
| Symbol | |
|---|
| ID | 8227948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5270996 |
|---|
| End bp | 5271283 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644932192 |
|---|
| Product | Ribosomal protein L25/L23 |
|---|
| Protein accession | YP_003088712 |
|---|
| Protein GI | 255038091 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0089] Ribosomal protein L23 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000178584 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.183841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAC TGAAACGTCC GATTATTACT GAAAAGGTAA CGGCTCAGGG TGGTCAAGGT
AAATACGCTT TCGAAGTCTC CCTTACTGCA AACAAGGTAG AGATCAAGAA AGCTGTTGAG
AAACTGTTCG GGGTTACCGT AGAAAGCGTT CATACCATGC GCAGCATTGG TAAAAGCAAA
TCCCGCACAT CGGGAGGTAA GTTTGTCACT GGAAAAACGT CAACGATCAA AAAGGCGATC
ATCACAGTAG CCGAAGGCGA AGCGATCGAT ATCTACGGAG AAGCCTAG
|
|---|
| Protein sequence | MSVLKRPIIT EKVTAQGGQG KYAFEVSLTA NKVEIKKAVE KLFGVTVESV HTMRSIGKSK
SRTSGGKFVT GKTSTIKKAI ITVAEGEAID IYGEA
|
|---|
| |