Gene Dfer_4325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4325 
Symbol 
ID8227928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5245414 
End bp5247834 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content56% 
IMG OID644932172 
Producthypothetical protein 
Protein accessionYP_003088692 
Protein GI255038071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTACG GAACACCACA GTGGTTGCTC ATCCTGCTGA TCTTGACCTT TCGGACCGGC 
ATTGCCCTTC CGCAGTCCAT TGACCTTTCC AAAAGCCAGA TTTACAGTCC AACCGGCAAG
GCTACCCTGC TCCGAAGCAT TGAAATACTG CAAAATGAGG TGGAAAAGCG GACGGGCATC
CGGCTATCCG TAGCGAAAAA ACTTCCCAAA GCCGGCAATG TTATCGTAGT AGCCCTCGAA
AGCGACGCCA CGCAGCTGCC CGCGCAATAC CGAAATGCGA TAGCCCCATT GCCCGAAACG
AAAAGCGAAG GTTTTAAAAT TGCCGTAGCG CCCGCCAATT CCATCATTAT TGCGGGAAAA
GATGCGCGGG GGATTCTGTA CGGCGTGGGA AGATTCCTGC GAAAAGCGGA CATGACGCCC
GGCAAGTTGC AGGTAAGCCA AAACATTGCG CTCAGTACCA GTCCGCGCTA CCCGATGCGC
GGCCACCAAC TCGGTTACCG CCCCAAAACG AACGCTTACG ATGCATTTAC GGTTGCCGCT
TTCGACCAAT ACATTCGCGA ACTCGCACTA TTTGGTGCCA ATACCATAGA AATACTCCCT
CCCCGCACGG ACGACGACGC GACCAGCCGC CACATGAAAA CCCCCGCCCC GCAAATGATC
GTCGAGCAAT CGCGCATTTG CCGGTCCTAC GGGCTGGACG TGTCGATATG GTATCCCAAC
ATGGGCAAAA ACTATGTTCA TCCGGATTCC GTCGCGAAAG AACTGGCGGA ACGCGACCAG
GTGTTCGCGA GCCTGCCCAG GCTCGATGGC GTATTCGTGC CCGCGGGCGA CCCGGGCGAA
CTGGAACCCG ACGTGCTTTT CACCTGGCTC GAAAAAGAAG CGGCGGTGTT GCAGAAATAC
CATCCCAATG CCAAAATATG GGTATCGCCC CAGGTTTTCC GGCCCACGCA AAAGTGGTTC
GATGCGTTTT TTAATCATGC CAATAAAGGC TATCCGTGGT TTGGCGGGGT GGTTTTCGGG
CCCTGGGTGA AAATCCCGGT GCAGAAGATC CGCGAAATGC TTAAACCTTC CATCCCAATT
CGCCATTATC CCGACATTAC CCACAATTAC TCCGCGCAGT ACCCGGTACC GCATTGGGAC
CTCACGTGGG CGATGACGCT CGGGCGCGAG AGCATTAATC CCCGCCCGAT GGACGAAAAA
GCCATTCACA ATGCATTGGA CGAATATGGA ATCGGCAGCG TGAGCTATTC GGAGGGCACC
AACGACGACG TCAACAAATT TGTATGGAGC GACCAGGACT GGGACCCCGA AATGCCGGTA
ATGGAGACGC TGCGCGATTA CAGCCGCTTG TTTTTAGGTT CTGAATACAA AGAAGCAGGC
GCTCAGGCCA TCGCGGCGCT CGAAAAAAAC TGGCGCGGCG AAGTGCTCAC CAACGACGCC
ATTGATATGA CGCTCCGCCA ATGGCAGCTG CTGGAAAACA ATGCCCCATT GGACCTACTT
CAAAACCCGC GCTTCCAGAT GGGCCTGATC CGCGCCTATT TCGACGCTTA CACCCGCCAG
CGGCTCATTT ACGAAACCGA ACTGGAACAA CAAGCCCGGC GCGCATTAGC CTCGGCGGGT
AAGTCGGGAG CAGTGAAAGC AATGCGCGAT GCGGATGAAA TTTTGCAAAA AGCCTGGAAA
GAGCGTATCC TGCCCGATTA CCAGCAAAAA TGCCAGAATC TGGCAGACTC GCTGTACAAA
AGCATCGGCG CGCAGCTGAC GATGCAGAAG CACGGTGCAA TGTCAGGAAG AGGGAACTTT
ATGGATCTGA TCAACATGCC GCTGAACGAT GCGCCCTATT TGCTGGATCA GTTCAAAAGA
ATAGAAAGAC TAAGCAGCGA GGCGGAAATG CTGCGGGAGA TCGACCAGCT CCTGCATCGC
ACCGATCCCG GCCCGGGCGG TTTTTACGAC CATTTCGGCG ATCCGGAGAG CTGGTACCGC
GTGGTGCCCG GCCTGCCGTG GGAACAAGAT CCGGGCAGTT TACAGTCGCC GCGGATCGGC
TTCGGGGTGG GCCTGGTGGG TGAAGAGTGG GTGGACGAAA TTCAGGCGAC GGGCTTTAAA
GGACAGGTCA CGCCCCGCGT GTGGATGAAG CAGGCCAAAA CGCTGTACGA CCAACCGCTG
CGCATCCGCT ACGAAACCCT CGATCCCGAT GCGACGTACC GCATGCGCAT TTCCTACACG
GGCCGCTTCC GCTCGCGCAT GAAAATGACC ACCGACGACG GCATGACGAT CCATGATTTT
ATCCAAACCG GCGAGCAACC GACATTTGAA TTCAACATTC CCAAAAGCTC GACTGCGGAT
GGTAAAGTTA CCTTCGAATG GACTTGCGGC GAAGGTGAAC GCGGCTCGCA GGTGACGGAG
ATCTGGTTGA TGAAACAATA A
 
Protein sequence
MRYGTPQWLL ILLILTFRTG IALPQSIDLS KSQIYSPTGK ATLLRSIEIL QNEVEKRTGI 
RLSVAKKLPK AGNVIVVALE SDATQLPAQY RNAIAPLPET KSEGFKIAVA PANSIIIAGK
DARGILYGVG RFLRKADMTP GKLQVSQNIA LSTSPRYPMR GHQLGYRPKT NAYDAFTVAA
FDQYIRELAL FGANTIEILP PRTDDDATSR HMKTPAPQMI VEQSRICRSY GLDVSIWYPN
MGKNYVHPDS VAKELAERDQ VFASLPRLDG VFVPAGDPGE LEPDVLFTWL EKEAAVLQKY
HPNAKIWVSP QVFRPTQKWF DAFFNHANKG YPWFGGVVFG PWVKIPVQKI REMLKPSIPI
RHYPDITHNY SAQYPVPHWD LTWAMTLGRE SINPRPMDEK AIHNALDEYG IGSVSYSEGT
NDDVNKFVWS DQDWDPEMPV METLRDYSRL FLGSEYKEAG AQAIAALEKN WRGEVLTNDA
IDMTLRQWQL LENNAPLDLL QNPRFQMGLI RAYFDAYTRQ RLIYETELEQ QARRALASAG
KSGAVKAMRD ADEILQKAWK ERILPDYQQK CQNLADSLYK SIGAQLTMQK HGAMSGRGNF
MDLINMPLND APYLLDQFKR IERLSSEAEM LREIDQLLHR TDPGPGGFYD HFGDPESWYR
VVPGLPWEQD PGSLQSPRIG FGVGLVGEEW VDEIQATGFK GQVTPRVWMK QAKTLYDQPL
RIRYETLDPD ATYRMRISYT GRFRSRMKMT TDDGMTIHDF IQTGEQPTFE FNIPKSSTAD
GKVTFEWTCG EGERGSQVTE IWLMKQ