| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4312 |
|---|
| Symbol | |
|---|
| ID | 8227915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5226946 |
|---|
| End bp | 5229189 |
|---|
| Gene Length | 2244 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644932159 |
|---|
| Product | two component regulator propeller domain protein |
|---|
| Protein accession | YP_003088679 |
|---|
| Protein GI | 255038058 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGA CTGAAAAACA ACTGATTGCC GGGCTGCTTT GCGCCTTGCT GCCGTTGCTC
TACTCGTGCC GGAGTGAAAA GACCGTCGAT GACGGCGCTT CCTTTTACCA GGATGAGCCA
TTCACACAGG AATTTCACGA AGCGCATGCG ATGGAAGGCA ACGACGTTCG GGCTGTTCTG
CCCGATCGCG ACGGCAACGT ATGGGCAGCC ACGGCAAAGG GTGTTTTTCG AAAAATGAGG
GGTTACAATA ATTGGGTACC TGTATTGGAT GGCGATGAGA ATGGCCCGTC GTTTGCACTC
GCCCAGGATT CCATCGGCAC CATTTGGCTC GGGATGTGGA ATGGGCTGTA CCAATACAAA
AACGGTACTA TTTCAAAAGC AAATGGCCCT GCTGGCCCCA TTTCAGCTAT TTGCGCAAAA
GCCGGCACGG TCTGCGCACT CGGCCCGAAT GGCTTTTGGA CAAGTAATTC CAATGGTTTT
ACATTACAAA AAGCGGCCAT TGCCAGATCA GTACGCGATG TGATCAGCGA CGGGAAGGAC
GGACTTTGGA TAGCTTCCGA TGTGGGACTT TACCATTGGA CGCCTACGCA TTTGGAACAC
ACCTATAAAA CCGACGCATT GATTGCCGCT TATACCAAAG GCTTGGCATA CAACCACGAC
GGTAAGCTCT GGGTCGGTGG TTTGGGCGGG GTTACCATTC AACATAATGC TCGAAAAGAA
GCCGAATTGC GGACTACCGA CGGTATTCCT TCGACTTACG TGACAGCCGT GCGTCTCGCA
CCCGATAGCT CGATGTGGGT AGGCACGCAA AACGGCGTGG TGCGTTTTTG GAAAGACGGG
CGCCGCTCGC TGCTGTTTTC CAGAAGGTGG CTCGTAGACG ACCAGGTGAA CGACATTGCA
TTTGATAATG AGGACAATGC ATGGATAGCC ACGCCGCAAG GTGTAAGTGC CATCAAAAAA
CGGAGGATGA CGCTGGCATC GAAAAGTACA TTCTTTTATG ATGTATTAAT GAAAAGGCAC
ATCCGCGCAC CGTGGATCGC CGGGCAGGCA CATCTGCATG TCGCCGGAGA CACTACCACC
TGGGAACCGG AGGATGATGA TAACGACGGC GAATATACGG GCAACTACCT CGCGATGGAG
AGTTTCCGCT ATGCAGCCAC CAAGGATCCG GTAGCCAGGG AGCATGCTAA AAAAGCATTC
GGCTTCCTGA AAATGTTGCA GGAAGTGACC GGCACGAACG GTTTCTTCGC CCGCACGATC
ATTCCCGCCA CGTGGACGCG CATGCACGAC GGCAACCGCA CCTACACGGA GCGCGAGCGA
GCGGACGAGC TGGTGAAGGA GCCGCGTTTC AAACCCGTGG AGACGCGGTG GCATTTGTCG
GCCGATAAAA AGTGGCTTTG GAAAGGCGAT ACGAGCAGCG ATGAAATGTG CGGGCACATG
TTTGGCTACT ACTATTATTA TACACTCGCG GCCGACGCCG AAGAGAAAAA GGTGATTGCC
GCACATGTGG GCCGCATTGT GGATTATTTA ATGCAGCATA ACCTAAATTT TGCAGACGTC
GACGGCACGG CTACCCGGTG GTCGGTGTGG TCGCCCGACC AGCTGAACCG CGACCCCGAA
TGGCTGCCCG ACCGCAACCA GAACTCCATG GAAATGCTCG CATTCCTGAA ATTGGCGCAT
TTCATGACCG GCCAGGCCAA ATACCAGAAC GAATACCTGC GGCTGATCGA AGAGGAGCAT
TACCTCGACA ATATGAAAGA GGTGACGAAG CAAAATCCAG CCTGGTTCAT CTATTTCGAC
GTGGTATTGC AAGCCTACCT CTACCCGATC CTCATCCATT GCGAAAATGA CCCGGAGCGG
TTGAAGTTTT ACAGAAACCA CCTTGAAGCG TGGTTTCAGA AGCGCAAGGG CGACCATAAC
CCGCTCATCA ACTTTATCTA CAATGAATGC CTCGGCAAAA AGGCGGAGTT GGAAAACTCG
GTGGATTTCC TCGTCGACAC ACCGCTGGAT CTCGTAGACT GGCCGATCGA TCATCGGAAA
CGGGAAGACA TTCAAGTGGT ACGCACCCCG GTGCTGGAAG ACGAACAAGT TCATGAACTG
CAACCGGCCA GCATACGGCT GACCGTTCGT TGGGATAAAA ACCCTTGGAC GCTCTCCGGC
GGCGATCCGC ACGTGGAGCG CGAGCCGGTT TTCTGGCTTT TGCCCTACTG GATGGGCCGG
TATCTTGGAA TGATCTCGAA ATAG
|
|---|
| Protein sequence | MRPTEKQLIA GLLCALLPLL YSCRSEKTVD DGASFYQDEP FTQEFHEAHA MEGNDVRAVL
PDRDGNVWAA TAKGVFRKMR GYNNWVPVLD GDENGPSFAL AQDSIGTIWL GMWNGLYQYK
NGTISKANGP AGPISAICAK AGTVCALGPN GFWTSNSNGF TLQKAAIARS VRDVISDGKD
GLWIASDVGL YHWTPTHLEH TYKTDALIAA YTKGLAYNHD GKLWVGGLGG VTIQHNARKE
AELRTTDGIP STYVTAVRLA PDSSMWVGTQ NGVVRFWKDG RRSLLFSRRW LVDDQVNDIA
FDNEDNAWIA TPQGVSAIKK RRMTLASKST FFYDVLMKRH IRAPWIAGQA HLHVAGDTTT
WEPEDDDNDG EYTGNYLAME SFRYAATKDP VAREHAKKAF GFLKMLQEVT GTNGFFARTI
IPATWTRMHD GNRTYTERER ADELVKEPRF KPVETRWHLS ADKKWLWKGD TSSDEMCGHM
FGYYYYYTLA ADAEEKKVIA AHVGRIVDYL MQHNLNFADV DGTATRWSVW SPDQLNRDPE
WLPDRNQNSM EMLAFLKLAH FMTGQAKYQN EYLRLIEEEH YLDNMKEVTK QNPAWFIYFD
VVLQAYLYPI LIHCENDPER LKFYRNHLEA WFQKRKGDHN PLINFIYNEC LGKKAELENS
VDFLVDTPLD LVDWPIDHRK REDIQVVRTP VLEDEQVHEL QPASIRLTVR WDKNPWTLSG
GDPHVEREPV FWLLPYWMGR YLGMISK
|
|---|
| |