Gene Dfer_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4292 
Symbol 
ID8227895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5206518 
End bp5207498 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID644932139 
Productbiotin synthase 
Protein accessionYP_003088659 
Protein GI255038038 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACCG AAACCATCCG CAAAGACTGG ACGCCCGACG AGATCGGGGC CATTTACAAC 
CGCCCGCTCA TGCAGCTTAT TTACGACGCG GCCACCGTGC ACCGGCAATG GCACGACCCG
GAGCGCATTC AGGTGTGCAC GCTGCTGTCG ATCAAAACCG GCGGCTGCCC CGAAGACTGC
GCCTATTGCG GGCAAGCGGC GCGTTACCAA ACGGGTATTA ACGTAAAAGC ATTGATGAGA
AAGGACGACG TGGTAGCCAT CGCCCGCCGC GCCCGCGAGG GTGGTTCGAG CCGCTTCTGC
ATGGCTGCCG CCTGGCGCGA AGTAAAAGAC AACCGCGATT TCGACCGCGT CCTTGATATG
GTGACAGAAG TGGCGGCATT GGGCCTCGAA GTATGCTGCA CCCTGGGCAT GCTCACCGAA
ACCCAGGCCG CAAAACTCAA AGCCGCCGGT CTCTACGCCT ACAACCACAA CCTGGACTCC
TCCGCCGAAT ATTATGAGCA AATCATCTCC ACCCGCACCT ACACGGACCG CCTGAACACC
GTCGACCACG TCCGCAAAGC CGGCATATCC GTCTGCTGTG GCGGCATCAT CGGCCTCGGC
GAAACGCGCG AAAACCGCAT GCAAATGCTC CATACCCTCG CCACGATGCC CGAGCACCCG
GAATCCGTGC CCGTCAACGC ATTAGCCCGC GTACAAGGAA CCCCGCTCGG CGACCGTTCG
AAAATCGACA CCTGGGAAAT GGTCCGTATG ATCGCCACAG CGCGCATTAT CATGCCGGCA
GCGATGATCC GTCTCAGCGC CGGGCGCATG GAAATGAGTG AATATGAGCA GGCGTTCTGC
TTTATGGCCG GGGCGAATTC GATTTTTACA AATGAAAACG GGGAGCTGCT CGTGACGCCG
AATCCGGGGA TGGGGGAGGA TAGGGGGATG ATGGAGAGGT TGGGGTTGAA GGCGCTTGTC
AGTGGGGAGG TGAATGCCTG A
 
Protein sequence
MLTETIRKDW TPDEIGAIYN RPLMQLIYDA ATVHRQWHDP ERIQVCTLLS IKTGGCPEDC 
AYCGQAARYQ TGINVKALMR KDDVVAIARR AREGGSSRFC MAAAWREVKD NRDFDRVLDM
VTEVAALGLE VCCTLGMLTE TQAAKLKAAG LYAYNHNLDS SAEYYEQIIS TRTYTDRLNT
VDHVRKAGIS VCCGGIIGLG ETRENRMQML HTLATMPEHP ESVPVNALAR VQGTPLGDRS
KIDTWEMVRM IATARIIMPA AMIRLSAGRM EMSEYEQAFC FMAGANSIFT NENGELLVTP
NPGMGEDRGM MERLGLKALV SGEVNA