| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4289 |
|---|
| Symbol | |
|---|
| ID | 8227892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5202869 |
|---|
| End bp | 5203993 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644932136 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003088656 |
|---|
| Protein GI | 255038035 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAA AAATTAATGT TGCCATTATC GGATTAGGCT TCGGCGCCGA GTTTATCCCC
ATTTACCAGC AACATCCCAA TGCCAATATG TACGCGATTT GCCAGCGTAC GGAATCGAAA
CTGAATGAAA TCGGCGACCA GTACGGCATT GACGTACGCT ATACCGACTA TGACGAGCTG
CTGAAAGACC CGAACATCGA CGCGGTCCAC ATCAACTCCC CTATCCCCAA CCACGCGGAG
CAGACATTGA AAGCCCTCCG CGCCGGCAAG CACGTGGCTT GTACCGTGCC GATGGCAACC
AGCGTAGAGG ATTGCATTGA AATCGTGAAA GCGACCCGCG AAACGGGCAA AAAATATATG
ATGATGGAAA CCGTGGTGTA CGCACGCGAA TTCCTGTTTG TCAAAGAATT GTATGAAAAA
GGCGAGCTGG GCAAAGTTCA GTTCCTCAAA GCGAGCCACC AGCAGGATAT GGAAGGATGG
CCCGACTACT GGCCGGGATT GCCTCCAATG CACTACGCGA CGCACTGCGT AGGCCCGGTA
GCCGGCTTGC TGAAACTCGA AGCAGAATAC GTTTCATGCT TCGGTTCAGG AACGATTTCC
GAAGACCTGA TCAAGATCCA CAACTCGCCA TTCGCGGTAG AATCGGCACA TATTAAGTTC
AAAGACAGCG ACTTGTCGGC GTACGTGTAC CGCTCGTTGT TCGACGTGGC GCGCCAGTAC
CGCGAGAGCT TCGAGGTGTA CGGCAGCAAA AAATCATTCG AATGGCCATT GATCGAAGGC
GAAGATCCCG TGATCCACAC CGCGAAAAAG CCTGAGCACG AAATCGCTGA GAAAGTGACT
ACGCCGGATT ATGCACATTA TTTGCCGGAG GAGATCCGTC ATTTCACCGG TCACGGCGTT
TATAACCTGG ATGACAACGC CCACTTGTCG TTTGTACAAG GCGGCGGCCA CGGCGGTTCG
CACCCGCATT TGGCGCACGA GTTCATCAGC GCATTGATCG AAGACCGCGA GCCTTTCCCG
AACGCATGGC AGTCGGCCAA CTGGACGAGC GTAGGTATTC TTGCGCACGA GTCGGCAATG
CAAGGCGGCG CGATTATCAA ATTGCCTGAT TTTCAAAGTT TGTAA
|
|---|
| Protein sequence | MSQKINVAII GLGFGAEFIP IYQQHPNANM YAICQRTESK LNEIGDQYGI DVRYTDYDEL
LKDPNIDAVH INSPIPNHAE QTLKALRAGK HVACTVPMAT SVEDCIEIVK ATRETGKKYM
MMETVVYARE FLFVKELYEK GELGKVQFLK ASHQQDMEGW PDYWPGLPPM HYATHCVGPV
AGLLKLEAEY VSCFGSGTIS EDLIKIHNSP FAVESAHIKF KDSDLSAYVY RSLFDVARQY
RESFEVYGSK KSFEWPLIEG EDPVIHTAKK PEHEIAEKVT TPDYAHYLPE EIRHFTGHGV
YNLDDNAHLS FVQGGGHGGS HPHLAHEFIS ALIEDREPFP NAWQSANWTS VGILAHESAM
QGGAIIKLPD FQSL
|
|---|
| |