| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4257 |
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| Symbol | |
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| ID | 8227860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5152471 |
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| End bp | 5155014 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932104 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_003088624 |
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| Protein GI | 255038003 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.198729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAATCAGCAT AAATATAGGC GGCATTATCT TCCATATCGA GGAAGATGGC
TACGAGAAAC TGAAAGGCTA CCTCGCGTCT ATCCAGAAAT ACTTTTCGTC GTTCGCGGAT
AGCAAGGAGA TCCTTTCGGA CATTGAGGGC AGGATTGCGG AGCGGTTTTT AAACAAACAA
AAAGCAGAGA ACAAGCAGGT AATCTCGCTA TCGGATGTCG ATGAGCTGAT TGCCGCGATG
GGTACCGTGG CCGATTTCGA GGCGATCGAA GAAGGGGGCG AGTTCATCAC CGATCCGCTC
GAAGCCGCTT CCACATCCAC TTCGGCACCA AAACAGGAGG CTTATACTTC CTACCAGGCA
CCCATTCCGC CCAAAACGGA GCCTGCAAGG CCAGCTGGCC CCAAAAAGCT CTTCCGCGAT
CTTCGGAGAA AACTCCTCGG GGGCGTGGCG GCCGGTCTGG CGCATTACTT CTCGGTGGAC
CCGATCTGGG TGCGACTTGC CTTCCTTTTC GCGGTGGTAG GCCTGCCTGC CGGTTCAGGA
ATGCTCGATA TGCATAATGC CGATGAGGTT TTCGGACCGG TGTCGGGCTT TATGGTGCTG
GTTTACATTG CCATGTGGGT TGCTTTTCCG GGTACTACTA CATTGGAGGA GGATACCCAT
ATCAAAAAAT TCTACCGTGA TCCGGACCGC AAGGTGGTGG GTGGCGTGGC GGCCGGTGTG
GCTTCCTATT TCGGGGTCGA CCTGGGTGTG GTGCGTTTCC TGTGGGTGCT GTCGATCCTG
CTTTTTGGAA CCGGTTTCCT GATTTACATC GTGCTGTGGG TGATCGCGCC CACGGCCAAT
ACGCTCACCG AAAAAATGGA AATGCAGGGG GAGCCTATTA CCCTCTCCAA TATTGAGTCG
AACATCAAGC AAAGCCTCAA TTTGGAAGAA AGAGGGGGAG AAGAGCATAT CGCCACCAAA
ATTCTACTGT TTCCGTTCCG CGCCATCGGA TTGATCTTCT CGGCGGCGGG GAAGCTGCTG
AAAGGGCTGG GGCCAATTGT GCGGGTTTTG ATCGGCGTAT TCCTGATCGG TATCTCGGCA
TCGGGATTGC TGGGGCTGGT GGTAGCCGCC GGGATCGCGC TCGGGCTGAC GAGCGCCGGG
GCATTCGATA ACCTGCCGCT TCCGTTCGTG ATTTACCAAG AGTTGCCTGA AATACTTATC
ATCTCGGGGA TTTTCGTAGC AGCCATTCCA TTAATTACAT TCCTTTTGCT CGGTTTGACG
CTCGTTTCGA ACAAGCGGAT CGTCGGCGGG AGCGTTTGGC TTACCCTGCT CGGCCTCTGG
ATCGTGGGCG TGATCGGCGC GACTGTCGGC GGTGTTTCGT ACCAGCAGAA CTTTGCGAAA
AGAGGGGAAA TCGTTGAAAA CGAATATTAC CAGGCACCAA GAGGAACGCT GGTGCTGAAT
TTCGATTATG ACAACGACGA GGAGAATATC GACGTCGACC TGCGGCTGAC CGGCGCTAAC
ACCAGCGACA GCATCAGATT GGAAAAAGTC CTGAAAGCAC GCGGCCGGAC TCGCGAAAGT
GCCGAGCAGA ATGCCCGGGA TATCCGTTAC AGCCCGTCGC TCAAAGATTC GGTATTCACA
TTTACCGAAG GGCCGCTTAT CGCCGGCCGC ACCAAGTTCC GCGACCAGGA GATTGACCTC
ACATTGAGCA TTCCTTATAA CAAACCGTTC GTGATGACCC GCGACTTCTA CTTTTTGCTG
AGCGATTGGG AGCCCGAGCA ACGCAACCTG AAACGTTACG ATCTGGGACA CAATGACGAA
GTGGTTTGGA ATAGTCTGAT ATGGGAAATG CGCCGCGATT CGGGACTGGT TTGTACGAAT
ATTCCTTTGA AATACATCCG TAGCGAGAAT TCCGGTGACG ACCGCTCCGA CTATGGGTTC
GATTACAACG ACAACAGCGG CCTGGACCTG GGCGAACGCG GCAATTACAG TAAGCAGTTC
CCGGTTTCGG ATTTCAAAAA AGTGGACATT GGCGGGGCTT ATTCCATTAT CATCCGCCAG
GGGACGGAAT ACATGGTTAC CGCCGACTCG GACAATCAGG AGAATATCGA CGACATCCGG
GTAGTGGTGG AAGACGGTGT GCTGCGCGTG AAACGTTCGC GTGATTTCAA CCTCTTCGAC
GATCACGACT GGCAGCGCGT AGGCCTGGTG ATTACCATGC CCACCATTGA GCACTTGTCG
CTGTCGGGCG CCAATAAAAC GCTCGTTACC GAGTTCAAAG ACCTGCCCAA GCTGGACGTA
GAGGTTTCGG GCGCATCCAA ATCGGAGCTG AATGTGTTCA CGGACCAACT TTCAGTGAAT
ATCTCCGGCG CTTCCAAAGC TACGCTGCGC GGTCTGGCCA AAACGGCTAA GCTCGATGCC
CACGGCGCCT GCAAGCTCAC GGCCACCGAA ATGAATATCC AGAATGCCGA TGTGAACGCA
TCGGGCGCTT CGAAAGTGGA ATTGAGCCAT GTGCCAAACC TGAACCGGCA CGCCAGCGGC
GCAAGCAAGA TCAATGTGCA GTAA
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| Protein sequence | MKKTISINIG GIIFHIEEDG YEKLKGYLAS IQKYFSSFAD SKEILSDIEG RIAERFLNKQ
KAENKQVISL SDVDELIAAM GTVADFEAIE EGGEFITDPL EAASTSTSAP KQEAYTSYQA
PIPPKTEPAR PAGPKKLFRD LRRKLLGGVA AGLAHYFSVD PIWVRLAFLF AVVGLPAGSG
MLDMHNADEV FGPVSGFMVL VYIAMWVAFP GTTTLEEDTH IKKFYRDPDR KVVGGVAAGV
ASYFGVDLGV VRFLWVLSIL LFGTGFLIYI VLWVIAPTAN TLTEKMEMQG EPITLSNIES
NIKQSLNLEE RGGEEHIATK ILLFPFRAIG LIFSAAGKLL KGLGPIVRVL IGVFLIGISA
SGLLGLVVAA GIALGLTSAG AFDNLPLPFV IYQELPEILI ISGIFVAAIP LITFLLLGLT
LVSNKRIVGG SVWLTLLGLW IVGVIGATVG GVSYQQNFAK RGEIVENEYY QAPRGTLVLN
FDYDNDEENI DVDLRLTGAN TSDSIRLEKV LKARGRTRES AEQNARDIRY SPSLKDSVFT
FTEGPLIAGR TKFRDQEIDL TLSIPYNKPF VMTRDFYFLL SDWEPEQRNL KRYDLGHNDE
VVWNSLIWEM RRDSGLVCTN IPLKYIRSEN SGDDRSDYGF DYNDNSGLDL GERGNYSKQF
PVSDFKKVDI GGAYSIIIRQ GTEYMVTADS DNQENIDDIR VVVEDGVLRV KRSRDFNLFD
DHDWQRVGLV ITMPTIEHLS LSGANKTLVT EFKDLPKLDV EVSGASKSEL NVFTDQLSVN
ISGASKATLR GLAKTAKLDA HGACKLTATE MNIQNADVNA SGASKVELSH VPNLNRHASG
ASKINVQ
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