Gene Dfer_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4217 
Symbol 
ID8227819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5102227 
End bp5103006 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID644932064 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003088585 
Protein GI255037964 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.360311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAA ACCTGATTTT CGAAAACCGC GACGGCATTG CGCGAATCAC GCTCAACCGT 
CCGGACGTTT TCCACGCATT AAGCCCGGCG CTAATCAGCG AAATCACGCA AGCGATCCGC
ATTGCGGCCG AAGATGCCTC CGTGCGCGTG GTGCTCCTCA CTGCCACCGG CGAAAAGGCC
TTCTGCTCCG GCGCCGACCT AAAAGAAGCG AGCGCCTCGG GCATGAGCGC CGGCGAGATC
CTGCGCGACT ACTACGAGCC GATGATCACC ACCATCCGCG ACATTCCGAA ACCGGTCATC
TGCCGCCTGA ACGGCGTAGC CGTCGGTGCC GGTTGCTCAC TCGCATTGGC CTGTGACATG
GTGATAGCGG CCGAAGACAC ATATCTGAGC TTCGCATTCG TACAAATCGG ACTGATGCCC
GACGCGGGTG CGACGTTTTT CCTCCCGCGC ATGATCGGCC TCGCCCGCGC CTTCGAACTA
GCCTCAAGCG GCCGGCGCAT TCCCGCCACC GAAGCAAAGC AGATCGGCCT GATCACGCAT
TCGGTCCCCC GGGAGTCCCT CGACGAAGAA ACCGGGAAAC TTATCGCCTG CTACCGCCAC
GCCCCCACGC TCGCCATCGG CGCAATGAAG CGTGCATTCA ACCAATCGAT GCATTCAAAT
CTGCCTCAAA TGCTGGAAAC GGAGCGGGAA AGTCAGGAAA TGCTGTTTGG AACGGATGAT
GTGCGGGAAG GAATTGCAGC TTTTTTAGAA AAGCGAAAGC CTGATTTTCA GGGCAGATAG
 
Protein sequence
MYQNLIFENR DGIARITLNR PDVFHALSPA LISEITQAIR IAAEDASVRV VLLTATGEKA 
FCSGADLKEA SASGMSAGEI LRDYYEPMIT TIRDIPKPVI CRLNGVAVGA GCSLALACDM
VIAAEDTYLS FAFVQIGLMP DAGATFFLPR MIGLARAFEL ASSGRRIPAT EAKQIGLITH
SVPRESLDEE TGKLIACYRH APTLAIGAMK RAFNQSMHSN LPQMLETERE SQEMLFGTDD
VREGIAAFLE KRKPDFQGR