| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4183 |
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| Symbol | |
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| ID | 8227781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5051561 |
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| End bp | 5053393 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932026 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003088551 |
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| Protein GI | 255037930 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.927446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCG GATATAAAAA TCTCAAAACA ATTGCCGCCA CCGCCTGCGC CGTGACGACC
ATTTTCCTGC TCGGCTGCGA CAAAGCGCGG TTGGAGCCCC GGCCGCTTTC CTTTTTCTCG
CCGGACAAAA CCTTCGACGA TCCCGACGGA CTGAAAGCGA CGCTCATCGC CTGTGAGCGA
AATATGCGCT ACGAGTGGTT TGGCGACAAT CCGCCGATCA TTACCGAGGC GATCTTCTCA
GACATTGCCG TGGAAGGCAC CACCGACAAA TCGGGCCCGG CGCAGAACAT GAACCTGCAA
ATCACCCCCG ATGCCCAACT CAACAGCACT GATTACAACC GGATCGGATG GTACTGGCTG
GAAGGTTACA AGGGTATTAA ATATGCCAAT GTGGCCATTT CGCGGATCAA CCAACCTACT
TATGGAAGTG AGGCCGAAAA AAATGCATTA CTCGGAGCAG CCTACTTTCA CCGCGCCTAC
CGTTACTACC GCCTTGTGCA CCAGTTTGGC GATGTGCCGC TGATCCTGGA TGAAGTAGTG
GAACCAAAGC TGGATTTTTA CTCGACGAAA AGAGAGGTGA TTTTGCAAAA AATGAAAACA
GACCTCGAAT TCGCCGAGCA ATGGGTGCCT GCTATGACGG ATAAAGGCAC TGTGAACAAA
GGCGCCGTGA GCCACCTGCT CACGAAGATC AACCTCGCAT TGGGACTTTT TGACGATGCG
ATCAAATCGG CGGGTAATGT GATCGATGGC GGAACGCACC GGCTGATGAC GAGCCGTTTC
GGGGCACACC TGGGCGACCC GACCAAAAAC CTCATTTGGG ACCTCCACCG GCCGGAAAAC
AAGTCCATTG CCAACAATAC CGAAGCATTG CTGCTCGTAA TCGACCGCTT CATGATGGAT
GGAAATTTCG ATGGCGGTAT CCAATCCATG CGGAATGCCG TGCCGTTCTG GCACAACAAC
ATCAATACGC CCAACGGAAG CCGCGGCACG ATCGATACCT ATAATATTGA AATAGACCAG
GTGACCAGGT TTGGGCGGGG CATTGGCCGC CTGCGGCCTA CCTACTATTC AACCGACGGC
GTTTGGGATG ATAAAAATGA TTTGCGCCAT GCGCCGGGCA ACTGGATGCG AATGGAAGAT
TTGGTATATA ACAATCCGGC GTTGAAAGGA AAGGATAGCT TCTTTGGGAA AAACCTCCAA
CTCCGCACCA CCGACGGCTC ATTGCTCACC ATCGACACCA TCCGCTGCTG GTTCGACTGG
CCGCATTATA AACTATATGT CCCCGACCCT GAGCGCGTGC AGCCGGCAGG TGGCCACACC
GACTGGTACG TTTTCCGACT GGCCGAAACG CATTTGTTGC GCGCCGAAGC CTACTTCTGG
AAAGGCGACC TCGCCAATGC AGCCAAGGAC CTGAACGCCG TGCGTGAAAG AGCCGGCGCC
GCTCCCATTG CCGCCGGTAA AATCAATATC GGGACGATCC TCGACGAAAG AGCACGCGAG
CTCTACTACG AAGAACCGCG CAAAACCGAG CTGACCCGCA TTGCTTACAT TCTGGCGCAA
ACCGGCAAAA CTGCATACAA CGGCAAAACA TACAGCCTGA ACAATTTCTC CGACGACAAC
TTCTTTTACG ACCGCGTGAT CGAAAAAAGT AACTTCTATA ATAAAGGTGT CAAAACAAGG
CATGGCGACG AATACCTGAT CAGCCCGTAT CACGTGCTCT GGCCCATCCC GTCACCCACG
ATCCAGGGAA ATACCAAGGG CATTATCAAT CAGAATAAGG GCTATGCCGG CTACGAGCGC
AATGTACCGC CGCTCACGAG CATTCCGCAA TGA
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| Protein sequence | MISGYKNLKT IAATACAVTT IFLLGCDKAR LEPRPLSFFS PDKTFDDPDG LKATLIACER
NMRYEWFGDN PPIITEAIFS DIAVEGTTDK SGPAQNMNLQ ITPDAQLNST DYNRIGWYWL
EGYKGIKYAN VAISRINQPT YGSEAEKNAL LGAAYFHRAY RYYRLVHQFG DVPLILDEVV
EPKLDFYSTK REVILQKMKT DLEFAEQWVP AMTDKGTVNK GAVSHLLTKI NLALGLFDDA
IKSAGNVIDG GTHRLMTSRF GAHLGDPTKN LIWDLHRPEN KSIANNTEAL LLVIDRFMMD
GNFDGGIQSM RNAVPFWHNN INTPNGSRGT IDTYNIEIDQ VTRFGRGIGR LRPTYYSTDG
VWDDKNDLRH APGNWMRMED LVYNNPALKG KDSFFGKNLQ LRTTDGSLLT IDTIRCWFDW
PHYKLYVPDP ERVQPAGGHT DWYVFRLAET HLLRAEAYFW KGDLANAAKD LNAVRERAGA
APIAAGKINI GTILDERARE LYYEEPRKTE LTRIAYILAQ TGKTAYNGKT YSLNNFSDDN
FFYDRVIEKS NFYNKGVKTR HGDEYLISPY HVLWPIPSPT IQGNTKGIIN QNKGYAGYER
NVPPLTSIPQ
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