Gene Dfer_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4174 
Symbol 
ID8227772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5037064 
End bp5037849 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content56% 
IMG OID644932017 
Productacetylglutamate kinase 
Protein accessionYP_003088542 
Protein GI255037921 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000373666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA CCTTATACGT TGTCAAGATC GGCGGTAATG TGATCGATAA TCCCGAAGCA 
TGTACCCGTT TTCTCCAAGT ATTTGCGCAG CTCGATGCCC CCAAAATCCT CGTCCACGGC
GGCGGGAAGG TAGCCACGCA AATCGCCGCG AAATTGCAGA TCGAAACACA GATGGTCGAT
GGCCGCCGCA TTACCGACCA GCCGATGCTG GACGTGGTGA CGATGGTTTA CGGAGGACTG
GTTAACAAAA ACCTCGTAGC CCAGCTCCAA GCCGCCGGCT GCAACGCCAT CGGCCTCACC
GGCGCCGACG GCGGCATTAT CCGTTCCGTA AAACGCCCTG TAAAAACGAT CGACTACGGC
TTCGTAGGCG ACATCGAAGC AGTGAACGGC GCGCAAATCA GCGCCATCCT GTCGAGCAAT
CTCACGCCAG TGATCGCCCC GTTGACATAC AGCGCCGAAG GCCTGCTCCT CAACACCAAT
GCCGACACCA TGGCCTCCGC CACCGCCGTA GCCATGTCCG AGGCATTCGA AGTGAACCTC
ATTTATTGTT TCGAGAAAAA AGGCGTCCTC TCCGACCCGG ACGACGACGA TGCCGTGATC
AGCAAGCTCA TTCCCGCCAC TTACGAAGAA TATAAAGCAT CCGGCGCCAT TAATAAAGGT
ATGATCCCGA AGCTGGACAA TGCATTCGCT GCATTGAATG CGGGCGTGAA GCAGGTGACC
ATTTGCCATG CGGATGAGCT GGCGAACGCG GTTTCGGGTG GGGCGGGGAC GGCGATTGTG
TTGTAA
 
Protein sequence
MSQTLYVVKI GGNVIDNPEA CTRFLQVFAQ LDAPKILVHG GGKVATQIAA KLQIETQMVD 
GRRITDQPML DVVTMVYGGL VNKNLVAQLQ AAGCNAIGLT GADGGIIRSV KRPVKTIDYG
FVGDIEAVNG AQISAILSSN LTPVIAPLTY SAEGLLLNTN ADTMASATAV AMSEAFEVNL
IYCFEKKGVL SDPDDDDAVI SKLIPATYEE YKASGAINKG MIPKLDNAFA ALNAGVKQVT
ICHADELANA VSGGAGTAIV L