Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4164 |
Symbol | |
ID | 8227762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5024295 |
End bp | 5027417 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932007 |
Product | acriflavin resistance protein |
Protein accession | YP_003088532 |
Protein GI | 255037911 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0666932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.648782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATTA CCGAAGTAGC CGTAAAGAGA CCGCTCTTCA TCACCGTAGT ATTCGTCGTA CTGGTACTAT TCGGGTTGAT CAGCTACAAC CAATTGTCTT ACAACCTGTT GCCTAAATTC GAGGCCAATG TTGTGAGCGT GATGACGACC TACCGCGGTG CTTCCGCGGA CGAAGTCGAA ACGAATGTGA CGAAGCATAT CGAGGATGCT GTGTCGGCCA TTGAAGGTCT GGACCAGATC AACTCGACTT CGCAGGAAGG GGTATCGTCC GTGATTATCC AGCTCAAGCA GGGCATTAGC GTCGATTTGG CGCAGCAGGA AGCGCAGCGG AAAGTGGAGC AGGTGATTTC GCTCCTGCCC GACGACGCCG ACCGCCCCGT GATCAACAAA TTCTCGACCG ACGAAATCCC GGTTTTGAGA ATGGGTGTGA CGGCGAACCT GTCGCCCTCT GCATTGTACG ACCTGATCGA CGACAAGCTG AAACCGCAGC TTTCGAACGT GGCGGGTGTG GGGCAGGTGA CCATTATCGG TGGTACCGAG CGCCAGATCC AGGTGAATAT CAGTCAGGAT AAATTGAAGG CTTACCATTT GTCGATCAGC CAGGTTTCGG CCGCGATCAA CAATGCAAAC ACTTCTTACC CGGCCGGCCA GGTGAAAACC CAGGACGACC AGTTGTCCAT CCGTTTCGAT GCCAAGCTCA CTACGGTTGA AAATCTGAGA AATGTAATCG TAGGTAAATC TTCGAATGGC GGACAGGTCT TTTTGAGGGA CATTGCCGAG GTGTATGACG GCGTGGCCGA TGCTACGGCG GTGAATCACA TCAATGGCCG TCCGTCGGTG GCATTGCAAA TCCAGAAACA ATCCGATGCG AACGCGGTGG ACGTGAGCAA GCTCACCCGC GAGCGCCTGA CGAGCCTGGA AAAGCAATAT GCGTCGCAGG GTTTGAAATT TAACATCGCC TCTGACCAGT CCATTTACAC ATTGGCATCG GCCGACGCCG TGGTATTTGA CCTTGGACTC GCCGTGTTGA TTGTGTCAGT CGTGATGCTA TTGTTCCTTC ACAGCTTCCG GAGCTCGATG TTCATCCTCG TGGCGTTGCC GTCGTCGATG ATCCCGACGT TCATTCTGAT GAGCGTAATG GGCTTCTCGC TGAACCTGAT GACGCTCATG GCGCTCTCGC TCGTGGTGGG TATCCTCGTC GATGACTCGA TTGTGGTGTT GGAAAACATC AACCGCCACA TGGAAATGGG CAAAAGCCGC TGGCAAGCCG CATTGGATGG TCGGGCCGAG ATTGGTTTCA CCGCATTGGC CATTACCCTG GTGGACGTGG TGGTATTCGT GCCGCTCGCA TTGACGCAGG GCCTCATCGG TAATATTTTG CGCGAGTTCT CGCTCGTAGT CGTGTTCTCG ACATTGATGA GTTTGCTCGT GTCATTCACC TTGACGCCGC TGCTTGCATC GCGTTTCGGT AAGGTGGAGG TTTTGGATAA AAACACGCTT TGGGGCCGTT TGAACCTTGG TTTCGAGAAA TTTCTGGATA ATATCAAAGA AGAATACGGT CGCATCCTCA CCTGGGTGCT GGGCCACAAG CGCTACATTT TCCTGCTTTC TCTGGCATTG ATCATCGGGT CGATTGCGTT GGTACCGGGC GGGTTCGTGG GAGCGGCATT CATGCAGCAA AGCGACCGCG GCGAGTTGAA TGTGTCGATT GAACTCGCGC CGACGGCGTC CGTTTACCAA ACCAACCAGG TAGCGCAGCG TGTGGAGAAA ATCCTTTTGG CCAAACCCGA AGTGACCAAG GTATTTACCA ATGTCGGTTA CAGCAGCACC GGTTTGGGAA CCACTTCCAA CAGCAACATT GCCGATTTGA CTGTGCAATT GGTCGATAAG AAAGAGCGTA CGGTTTCTTC CGAAGAATTT GGTCAAAGCA TTGAAAAAGA GGTATTGCAA ATCCCGGGCG TAAAAGTGAC CGTGGCGCCG ACTTCGATTA CCGGTAATGC CAACCAGGCG CCGATCCAGG TGGCCGTAAA AGGTACGGAC ATGACCGTGA TCCGCAAAAC GGCCGCGCAA GTGAAGGAAA TCGTGGCTTC CGTGCCGGGA ACTTCCAACG TGGATTACTC GGTGGACGAC CCGAAACCGG AAGTAGGCGT GACCCTCGAC CGGGAGAAAA TGGCGCAGCT CGGCATCAAT GCCGCCGAAG TGGGAGCGAC CTTGCAAACC GCCTTCCGCG GCGACGACCG TTCGAAGTTC AAACAGAATG GTAAGGAGTA CGACATCATG GTGAACCTCG ACCAGATCGA CCGTTCGAAA GCCGATGACA TCCGCCAGCT CACTTTCGTG AACAACCAGG GCCAGACTTT CGAGCTCGCT CAGTTCGCGA CCGTGAAAGA AGGCATGGGC GAAAGCGTCC TTCAACGCAT CGACCGCCTG TCGTCGATCA CGATCAACTC GCAGGTAATC GGCCGTCCAT CCGGCTCGAT CGGTGCCGAC ATCCAGGCCA AAATGGCCAG CGTGAAGCTC CCCGAAGGCA TCAGCATCGA ATACCGCGGT GACCTGAAAA ACCAGGCCGA CGCATTCGGC AGCCTCGGCG CGGCATTGCT CCTGGGTATC ATTTTGATCT ACCTCATCAT GGTGGCGCTT TATGAAAGTA CCATTTATCC ATTCGTGGTA CTCTTCTCGA TCCCGGTAGC CCTCGTAGGC GCATTGACCG CCCTGGCTTT GACCATGGAA AGCTTGACGA TCTTCTCGAT TGTGGGTATG ATCATGCTCC TCGGTCTGGT AGCCAAAAAC GCGATTTTGA TCGTGGACTT TGCGAATCAG CTGAAAGAAG AAGGTTATGC ATTGAAAGAA GCGCTGATCG AAGCGGGTAA GGAACGTTTA CGTCCGATCT TGATGACTAC CATCGCGATG ATTGCGGGTA TGCTGCCGAT CGCATTGGCC TCCGGTGACG GTGCTGAGGT GAAGAATGGG ATGGCTTGGG TGATCATTGG GGGGTTGACC AGTTCCTTGC TTTTGACTTT GTTCCTGGTT CCTAGTGCTT ATTATGTGGT GGATAGGATT AAGGAGAAGC TTGCCAAGCG GAAGAAGCGG AAGAATAGGG AGGAGTTGGT TTTGGAGGCT TGA
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Protein sequence | MSITEVAVKR PLFITVVFVV LVLFGLISYN QLSYNLLPKF EANVVSVMTT YRGASADEVE TNVTKHIEDA VSAIEGLDQI NSTSQEGVSS VIIQLKQGIS VDLAQQEAQR KVEQVISLLP DDADRPVINK FSTDEIPVLR MGVTANLSPS ALYDLIDDKL KPQLSNVAGV GQVTIIGGTE RQIQVNISQD KLKAYHLSIS QVSAAINNAN TSYPAGQVKT QDDQLSIRFD AKLTTVENLR NVIVGKSSNG GQVFLRDIAE VYDGVADATA VNHINGRPSV ALQIQKQSDA NAVDVSKLTR ERLTSLEKQY ASQGLKFNIA SDQSIYTLAS ADAVVFDLGL AVLIVSVVML LFLHSFRSSM FILVALPSSM IPTFILMSVM GFSLNLMTLM ALSLVVGILV DDSIVVLENI NRHMEMGKSR WQAALDGRAE IGFTALAITL VDVVVFVPLA LTQGLIGNIL REFSLVVVFS TLMSLLVSFT LTPLLASRFG KVEVLDKNTL WGRLNLGFEK FLDNIKEEYG RILTWVLGHK RYIFLLSLAL IIGSIALVPG GFVGAAFMQQ SDRGELNVSI ELAPTASVYQ TNQVAQRVEK ILLAKPEVTK VFTNVGYSST GLGTTSNSNI ADLTVQLVDK KERTVSSEEF GQSIEKEVLQ IPGVKVTVAP TSITGNANQA PIQVAVKGTD MTVIRKTAAQ VKEIVASVPG TSNVDYSVDD PKPEVGVTLD REKMAQLGIN AAEVGATLQT AFRGDDRSKF KQNGKEYDIM VNLDQIDRSK ADDIRQLTFV NNQGQTFELA QFATVKEGMG ESVLQRIDRL SSITINSQVI GRPSGSIGAD IQAKMASVKL PEGISIEYRG DLKNQADAFG SLGAALLLGI ILIYLIMVAL YESTIYPFVV LFSIPVALVG ALTALALTME SLTIFSIVGM IMLLGLVAKN AILIVDFANQ LKEEGYALKE ALIEAGKERL RPILMTTIAM IAGMLPIALA SGDGAEVKNG MAWVIIGGLT SSLLLTLFLV PSAYYVVDRI KEKLAKRKKR KNREELVLEA
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