Gene Dfer_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4102 
Symbol 
ID8227700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4954615 
End bp4955478 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content53% 
IMG OID644931945 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003088470 
Protein GI255037849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.687191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGAG CTGCATTTTT CTTTTCGCTT ACCTCTGCGA TTTCCAAATG GCTTGGCAGG 
GAATTTCACA TTGTGCAGCT GGTGTTTTTC CGGAATATCG TCGGCGTGGT TTTCATCCTC
AGCAGCATCC GGCGCAGGCC GCTCCGGCAA GAAGGCGGGA AGCTCGGCTT GCTGATTTTC
AGGGGCGTGG TAGGCACATT GTCGCTTTAC ATGCTTTTCT ACGCGATCCA GACACTCGGC
CTCGGACGCG CCTCCACGTA CCAATACACT TACCCGATTT TTCTGGCGCT TTTGTCATGG
CTACTCATTG GTGAAACCCT CAATTCAAAG GAATGGCTGG CGATTTTCGT GGGCTTCACG
GGAATTTTGT TCGTGTTCCG GCCCGACCTT TCCTCGTCGC TGCGGGACAA TGCACTTGGC
CTGGGCAATG CATTGCTGAC CGCCATTTCC TACCTCTCGA TCCGCCAGCT CGGTGTGGTG
TACGACACGC GGGCGATCAT CCTTTCTTTC ATGCTCAGCG GCATTGTAAT GCCGATTTTG
TCGATGCTGG TAGGCACTTA CTATCCAATG GAACACCTGG ATTTTCTGAT CGGAACATTC
AAATGGCCGG AAAATGCGAT TCAGTGGCTG GGTTTTCTCG CATTGGGGCT TGCGGCGTTG
CTGGGCCAGA GGATGCTAAC CCAGTCATTC ACCCACGACA AAGCGGGGCG CGTTGCCGCG
GTGGGATATT CCAATATCCT TTTTTCCGTA TTGATCGGCT TTTTCATGGG CGAAGCCATT
CCTACCATCT CAATGCTCAC GGGCATGATC CTCATCATCG CGGGCGGGGT ACTGGTTTCA
TTTGCTAAAA CCAAAAATGC TTAA
 
Protein sequence
MLGAAFFFSL TSAISKWLGR EFHIVQLVFF RNIVGVVFIL SSIRRRPLRQ EGGKLGLLIF 
RGVVGTLSLY MLFYAIQTLG LGRASTYQYT YPIFLALLSW LLIGETLNSK EWLAIFVGFT
GILFVFRPDL SSSLRDNALG LGNALLTAIS YLSIRQLGVV YDTRAIILSF MLSGIVMPIL
SMLVGTYYPM EHLDFLIGTF KWPENAIQWL GFLALGLAAL LGQRMLTQSF THDKAGRVAA
VGYSNILFSV LIGFFMGEAI PTISMLTGMI LIIAGGVLVS FAKTKNA