Gene Dfer_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4085 
Symbol 
ID8227683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4931997 
End bp4933223 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content51% 
IMG OID644931928 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003088453 
Protein GI255037832 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.267024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA TTGAATTATT ACCGCATAAT GTCCCTTCTA ACAGCGAGTT ACCCGAACTC 
GTAGAAGAAC TGACCACCCT CAACCTCGGC CCGACACACC CTGCTACCCA CGGTATTTTC
CAGAATGTCC TCAAAATGGA CGGCGAAAAG ATCGTTTCGG GTGAGCAGAC CATCGGTTAT
ATCCACCGTG CATTTGAGAA AATCGCCGAA AGAAGGCCAT TTTACCAGAT CACGACGCTT
ACCGACCGCA TGAATTATTG CTCGTCCCCG ATCAACAACA TGGGATGGCA TATGACGGTC
GAGAAGCTGC TGGGCATCGA AGTACCAAAG AGAGCGCAGT ACATCCGCGT GATCATGATG
GAGCTCGCCC GCATTACCGA TCACATCATT TGTAACAGTA TCCTCGGTGT GGATACCGGC
GCATTTACCG GCTTCCTCTA TGTAATGCAG AAGCGCGAGG AGGTTTACGA GATTTACGAG
GAAGTTTGCG GAGCGCGCCT TACCACCAAC ATGGGCCGCG TAGGCGGAAT GGAACGCGAC
CTGTCAAGCG CGGCTATCCG CAAGATCAAC GACTTTATCA AATCATTCCC GGCTGTGCTG
CGCGAGCTCG AAAAGCTCCT CAACCGCAAC CGGATATTCA TGGACCGCAC CATTAATGTG
GGTCCCATTT CAGCAGAAAG AGCATTATCC TACGGCTTCA CCGGCCCTAA CCTGCGCGCT
GCGGGTGTGG ACTACGACGT ACGTGTGATG AACCCCTATT CTTCTTACGA GGATTTCGAT
TTCGAAGTGC CTATCGGGCA GTCGGGCGAT ACGTTCGACC GCTATATGGT CCGTAATGAA
GAAATGTGGC AAAGCCTTAA AATTGTGGAG CAGGCGATCA ATAACCTGCC CGAGGGCCCT
TATTATGCCG ATGCCCCCGA GTTTTACCTT CCTCCTAAAA ACGAGGTTTA TAAAAGCATG
GAAGCGCTCA TTTACCATTT CAAAATCGTA ATGGGCGAGA TCGACGCACC GGCTGGCGAA
GTATACCATG CTGTGGAAGG AGGAAACGGC GAGCTGGGCT TTTACCTGAT CAGCGATGGC
GGCAGGGCTC CGTACCGTCT GCATTTCCGC AGGCCAAGCT TTATCTATTA TCAGGCATAT
CCTGAAATGT GCAAAGGCTC ATCACTGTCG GATGCGATCC TGACGATGAG TAGCCTGAAC
GTAATTGCAG GTGAACTGGA CGCTTAA
 
Protein sequence
MADIELLPHN VPSNSELPEL VEELTTLNLG PTHPATHGIF QNVLKMDGEK IVSGEQTIGY 
IHRAFEKIAE RRPFYQITTL TDRMNYCSSP INNMGWHMTV EKLLGIEVPK RAQYIRVIMM
ELARITDHII CNSILGVDTG AFTGFLYVMQ KREEVYEIYE EVCGARLTTN MGRVGGMERD
LSSAAIRKIN DFIKSFPAVL RELEKLLNRN RIFMDRTINV GPISAERALS YGFTGPNLRA
AGVDYDVRVM NPYSSYEDFD FEVPIGQSGD TFDRYMVRNE EMWQSLKIVE QAINNLPEGP
YYADAPEFYL PPKNEVYKSM EALIYHFKIV MGEIDAPAGE VYHAVEGGNG ELGFYLISDG
GRAPYRLHFR RPSFIYYQAY PEMCKGSSLS DAILTMSSLN VIAGELDA