| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4032 |
|---|
| Symbol | |
|---|
| ID | 8227630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4881705 |
|---|
| End bp | 4882862 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644931875 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003088400 |
|---|
| Protein GI | 255037779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0540753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AGATCAATGT TGGCATAGTC GGTTACAAAT TCATGGGTCG CGCGCACAGT
AATGCGTGGA TCAAGGCGCC GTTGTTTTTC GATACGCCTT CAACGCCGGT CCTCAAAGCA
GCCTGCGGCC GCCATCAGGA ATCCCTCTCG GAGTTTGCCC AAAACTGGGG CTGGGAAGAA
ACCGAACCTG ATTGGCAAAA ACTCGTGACC CGGCCCGACA TCGATATCAT CGACATCGCA
TTGCCTCAGA ACCTTCATTA CGAAGTTGCC CTGGCCGCGG CGAAAGCAGG CAAGCATATT
TTCTGCGAAA AACCACTTTC CATGACCAGC GAGCAGGCCG CCGAAATGCT GAAAGTGTGC
CAGGAAACGG GCGTGAAGCA CTATCTCAAC CATAACTACC GCCGCGTCCC GGCTGTCGCG
CTTGCCAAAA AGATGATCGA AGAGGGCAAA ATCGGCCGGA TTTTCCACTG GCGCTGTGCC
TATCAGCAGG ATTGGATCGT TGACCCGTCA TTTCCGCTCA CCTGGCAATT GAAAAAGGAA
ACTGCGCAGG CCGGGCCGCA ATGGGACCTC AACTCGCACG CGGTCGACCT GGCCCATTTT
CTTATCGGCG ACGTTACGTC CGTGTCCGCA CTCACCACGA ATTTCATCAA AGAGCGCCCC
ATCGCCGATG AAACCGCCAC CGGCAGCCTC TCCGGCGCAT CCAAGGGCGA CGAAATGGGT
GAAGTAACCG TCGAAGACGC GGCATTAATG ATGGTAAGGT TCGAAAACGG CGCTATCGGC
TCGTTCGAAG CGACGCGCTT TGCGACAGGC CGCAAAAATC GCCTCACATT CGAAATCTAC
GGCAGCAAGG GTAGTCTCGT TTTCGACCTC GAACGAATGA ACGAGCTGCA ATACTATTCC
AACGAAGACA CCAAAGGCGA ACACGGCTTC CGGACGATCC TCGCGACGGA ATCCATTCAC
CCGTACGCCG GCAACTGGTG GCCCGCCGGG CACATAATCG GCTACGAACA CGCGTTCGTA
CACGCAGTGG TTGACTTTCT GAATGCCATT GAAAACGATA CGGACATCAA ACCGGACTTT
GCGGATGGAT TAAAGATTAT TCAGGTGCTG GAAGCGGGGC TGCGCTCGGC GGAGCTTGGT
GGCGAGGTGC GGTTGTAG
|
|---|
| Protein sequence | MKKQINVGIV GYKFMGRAHS NAWIKAPLFF DTPSTPVLKA ACGRHQESLS EFAQNWGWEE
TEPDWQKLVT RPDIDIIDIA LPQNLHYEVA LAAAKAGKHI FCEKPLSMTS EQAAEMLKVC
QETGVKHYLN HNYRRVPAVA LAKKMIEEGK IGRIFHWRCA YQQDWIVDPS FPLTWQLKKE
TAQAGPQWDL NSHAVDLAHF LIGDVTSVSA LTTNFIKERP IADETATGSL SGASKGDEMG
EVTVEDAALM MVRFENGAIG SFEATRFATG RKNRLTFEIY GSKGSLVFDL ERMNELQYYS
NEDTKGEHGF RTILATESIH PYAGNWWPAG HIIGYEHAFV HAVVDFLNAI ENDTDIKPDF
ADGLKIIQVL EAGLRSAELG GEVRL
|
|---|
| |