Gene Dfer_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4020 
Symbol 
ID8227617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4871698 
End bp4872804 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID644931863 
Productglycosyl transferase group 1 
Protein accessionYP_003088389 
Protein GI255037768 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA ACGTAGTGGT CTACGGAGTT GTGGCTGGAA GTTACAGAAC ACAAAACCTG 
ATCAGATCCC TTTTTGACAT TTCCGAGATA AATCTGTTTT ATCTCAATCC CGGACTTCTA
TGGGAACGGC CCTCCCTCTG GAACAAAATC CAGCGGATGA TCGTAGAACT GACCGTCGTG
TGGCGATCGG ACATCATTAT TATTCCGGCG ACGAGGCATC AAAACCCCTA CAAATACAAG
CTGGCGAAGT TCTTCAAAAA ACAGATAATT ACTGATTTCT ACATTTCCTA CTACGATACC
TTTGTCACCG ATCGCAAGAC GATAGCCAAA GAAAGCCCCG AAGCCGCCAA GCATTTCAAG
CTGGATCGGA ATGCTATTCT CTCATCCGAC CGCACCATTT TTCTCAATGG GTCCGAAGCA
GAATATTACA CAAGGCTGCT CGACATAAAA CTATCGGATA TCCGATACAG CATCGTTCCG
CTTTGCGTGG ATGCCCGCCA AAAGGCCGCA AACCCATTCG CGAACGGCAC TACGGATAAG
CTGACCATCT GCTGGTGGGG CTCCTATATT CCGCTGCACG GGCTGGATAA AATCATTGAA
GCCGCGCATT TGCTTTCCAA AATCATGTCG GACTTCGAGT TTGTGCTATT TGGGAACGAT
GATGAGAAAG CGATGCCTTT TCGAAATAAG ATCAGGGAAT TAGGGATAGA GAATTTTGTG
AAAATCGATA ATTCGAAATC CTTCCACAAC GGACAGCTGG AACCTTTCCT TGTGTCGCGC
TGCGACATTG CCCTGGGCGG TTTCGGCGAT AGTGAAAAAG CAAAAAACGT ATTTCTGAAT
AAGGTTGCCG ACGCGTTCGC GTTCGGAATC CCCGTTTTGA GTATGAAAAC CAAAGCTATG
GATACGCTGC TTTCGGGGGA CGACATCGTG ATCTGCGATA ATCAACCGCA AGCCATTGTC
GACGCAGTTA CAGCACTAAA AATGGACAGG GAAAGATTAA AGAAGATAGG AGAAAACGGA
TACAATCGAT ATCTCGATAC ATTCTCCTAC GAGGCCTTTA AATCGCGGGT TAAAGGGGTA
ATCCAACCTC AACTCAACGG TAACTAG
 
Protein sequence
MKLNVVVYGV VAGSYRTQNL IRSLFDISEI NLFYLNPGLL WERPSLWNKI QRMIVELTVV 
WRSDIIIIPA TRHQNPYKYK LAKFFKKQII TDFYISYYDT FVTDRKTIAK ESPEAAKHFK
LDRNAILSSD RTIFLNGSEA EYYTRLLDIK LSDIRYSIVP LCVDARQKAA NPFANGTTDK
LTICWWGSYI PLHGLDKIIE AAHLLSKIMS DFEFVLFGND DEKAMPFRNK IRELGIENFV
KIDNSKSFHN GQLEPFLVSR CDIALGGFGD SEKAKNVFLN KVADAFAFGI PVLSMKTKAM
DTLLSGDDIV ICDNQPQAIV DAVTALKMDR ERLKKIGENG YNRYLDTFSY EAFKSRVKGV
IQPQLNGN