| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3978 |
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| Symbol | |
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| ID | 8227574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4829790 |
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| End bp | 4830167 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931820 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003088347 |
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| Protein GI | 255037726 |
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| COG category | [K] Transcription |
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| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0593774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.384294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCGA TAGAACAAAT CAGGAGTGAG TTGCGGCCGA TTAGGTCGGA GGCGACTTAC
CGGGAATACC TGGGAATAAT TGATGAGCTG GTAGATTGCG CGGAAAACAG CCCTGAGGAG
GACGTGCTCG AACTGGTGTC GATTTTGGTT GAAAACTACG AAGCGAAGCA CTATCCGATA
GAGGCACCCG ATCCGCTGGA AGCGATTAAG ATCAGAATGG AGGAGCAGGG TTTGAGGCGA
AAGGACATGA TCGACTACTT TGGCAGCGCC AGCAGGGTGT CGGAAGTACT GAACAGAAAG
CGCCCGCTAA CCCTCGAAAT GATCCGGAAA ATTCATAAAG GGTTAGGGAT TTCTGCCGAG
ACATTAATAG CTGTGTAA
|
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| Protein sequence | MKPIEQIRSE LRPIRSEATY REYLGIIDEL VDCAENSPEE DVLELVSILV ENYEAKHYPI
EAPDPLEAIK IRMEEQGLRR KDMIDYFGSA SRVSEVLNRK RPLTLEMIRK IHKGLGISAE
TLIAV
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