| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3973 |
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| Symbol | |
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| ID | 8227569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4824982 |
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| End bp | 4825602 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644931815 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_003088342 |
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| Protein GI | 255037721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.297953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACAACA ATACTTCATT GATCTGGAAC GTCGTCCTTT CGCTTGCTGT GGCGGTGTTA
TTCTTCCTAC ATTTTTCAAG CAAATCGTCA GATTCGGGCG CAGCCGCAGA TGGTGCAGTA
GTGGAAGGCC GCCGCACTGT TTACGTTCAG GTGGATTCAC TTCTGAAAAA CTACGATTTC
TTCAAGGATA CCAGAAAAGA GCTTGAAAAC AAGAATTTCC AGCTTGAAAA CGAGCTGACT
ACCAAAGGAC GCTCTTTGCA AAATGAAGTA GCTTTCTTCC AGCAACGCGC CGCGACCATG
ACCCCCGAGC AAGCGCGCTC CACAGAAGCA CAGCTCATGA AAAAGCAGCA GGACCTGATG
GCCTACCGCG ATCAATCGGC ACAGGCATTG GGCCAGGAGG AAGCTAAAAA GAATGAAGAA
CTCTACAAAA ACATCCGTTC TTACATCGAC AAATACAACA AAGAAAACGG CTACGAATAC
GTGCTTGGCT ACTCACTGGG CGGCGGCATC CTCTTCGCAA ACCCGTCTCT GGATGTAACG
CAGAAGATCG TAGAAGGTTT GAATAAAGAA TACAAAAACG CCGGCAAACC TGCCGCAGCT
GATACTACCA AGAAGAAGTA G
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| Protein sequence | MNNNTSLIWN VVLSLAVAVL FFLHFSSKSS DSGAAADGAV VEGRRTVYVQ VDSLLKNYDF
FKDTRKELEN KNFQLENELT TKGRSLQNEV AFFQQRAATM TPEQARSTEA QLMKKQQDLM
AYRDQSAQAL GQEEAKKNEE LYKNIRSYID KYNKENGYEY VLGYSLGGGI LFANPSLDVT
QKIVEGLNKE YKNAGKPAAA DTTKKK
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