| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3970 |
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| Symbol | sdhA |
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| ID | 8227566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4821388 |
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| End bp | 4823376 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931812 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003088339 |
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| Protein GI | 255037718 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.755749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.869131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACGT CATCTCGTCT GGATGCCAAA ATACCGCAAG GAACGCTTGA AAGTAAATGG
AGCAAATACC GCTCGTCAGT ACCTCTTGTA AACCCTGCCA ACAAACGTAA CCTGGAAATC
ATCGTGGTTG GAACAGGCCT CGCAGGTGCT TCGGCGGCTG CTACCCTGGC TGAGCTCGGT
TACAAAGTAA AAGCGTTCTG TTTTCAGGAT TCGCCACGTC GTGCGCACTC GATCGCAGCG
CAAGGCGGGA TCAATGCAGC AAAAAACTAC CAGAATGACG GTGACTCGGT TTACCGTCTT
TTTTATGATA CCATTAAAGG CGGTGACTAC CGGGCGCGTG AAGCGAACGT GCACCGCCTG
GCCGAAGTTT CGGGTAACAT TATCGACCAA TGCGTAGCGG CGGGTGTGCC TTTCGCCCGT
GAGTACGGCG GCTTGCTGTC CAACCGCTCT TTCGGTGGAA CGCAGGTACA GCGTACCTTC
TACGCAGCGG GCCAGACGGG CCAGCAACTT TTGCTGGGAG CCTATTCCGG CTTGCAGCGC
CAGGTGGGTA TGGGTACCGT AAAAATGTAC AACCGCCACG AAATGCTCGA CGTCGTGAAT
ATCGATGGCA AATGCCGCGG TATCATCGCA CGTAACCTCA TTACAGGCGA GATCGAAAGA
CATGCAGGCC ACGCCGTATT GCTTTGTACA GGTGGTTACG GAAACGTGTT CTACCTTTCC
ACGAATGCAA TGGGCAGCAA TGTGACCGCG GCATGGAAAG CCCACAAACG CGGTGCATTC
TTCGGTAACC CTTGTTTTAC CCAAATCCAC CCGACTTGTA TCCCCGTTTC CGGCGAACAT
CAGTCGAAAC TGACCCTGAT GTCGGAATCG TTGCGTAACG ACGGCCGTAT CTGGGTTCCC
AAAAAGCAGA ATGATACCCG CCCGGGCAAC GAAATTCCTG AAAACGAGCG CGATTACTAC
CTTGAACGCC GTTACCCTGC ATTCGGTAAC CTCGTACCGC GCGATATCGC GTCGCGGGCG
GCGAAAGAAC GTTGCGATGC CGGTTACGGT GTAGGAACTT CCAAGCTGGC CGTTTACCTC
GATTTCGCTG CGGCGGTAGA GCGTTACGGA CGTGCCGAGG CGAATAAGAA CAATATTCAC
AATGCGTCCG AAGCCGACAT TATCACGTGG GGTAAGGCCG TTGTGAAAGA AAAATATGGT
AACCTCTTCG ATATGTATAA GCAAATCACG GGTGAAGATC CGTATGAAGT GCCTATGCGT
ATCTATCCTG CGGTGCACTA CACCATGGGC GGCCTTTGGG TGGATTACAA CCTGATGACC
ACCGTGCCCG GCTTGTACTC GCTTGGTGAG GCCAACTTCT CCGACCACGG CGCCAACCGC
CTCGGTGCTT CGGCATTGAT GCAGGGCCTT GCCGACGGTT ATTTCGTGAT TCCGTACACC
ATCGGTGCTT ACCTGGCGAG CGAAATCCGT ACCGGAAAGA TCTCTACCGA CCACGAAGCA
TTCGTGAAAG CGGAAGCCGA AGTGAAAGAG CGTATCGACA CATTGCTGCG CATTCAGGGT
AAAACATCTC CTGAGCTTTT CCACCGCCGT TTGGGCAAGA TTATGTGGGA AAAATGCGGA
ATGGCGCGTA ATGCGGAAGG TTTGAAAGAA GCGATCCAGG AAATCCGTCA GCTGAGAAGA
GACTTCTGGT CGGACGTGAA AGTAATGGGA ACCGCCAACT ACTTCAACCC CGAACTCGAC
AAGGCAAACC GCGTTGCAGA CTTCATCGAA CTTGGCGAGC TGATGTGTAT CGACGCGCTG
GACCGTAACG AATCCTGCGG TGGCCACTTT CGCGAGGAGT ACCAGACCGA AGAAGGCGAA
GCATTGCGCG ACGACGAGAA CTATATGTAT GTATCGGCCT GGGAGCACAA AGGTCCTGAG
AACTGGGAGC TTCACAAGGA AGAGCTGGTG TACGAAAACA TCAAAATCGC TCAGCGCAGC
TATAAATAA
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| Protein sequence | MATSSRLDAK IPQGTLESKW SKYRSSVPLV NPANKRNLEI IVVGTGLAGA SAAATLAELG
YKVKAFCFQD SPRRAHSIAA QGGINAAKNY QNDGDSVYRL FYDTIKGGDY RAREANVHRL
AEVSGNIIDQ CVAAGVPFAR EYGGLLSNRS FGGTQVQRTF YAAGQTGQQL LLGAYSGLQR
QVGMGTVKMY NRHEMLDVVN IDGKCRGIIA RNLITGEIER HAGHAVLLCT GGYGNVFYLS
TNAMGSNVTA AWKAHKRGAF FGNPCFTQIH PTCIPVSGEH QSKLTLMSES LRNDGRIWVP
KKQNDTRPGN EIPENERDYY LERRYPAFGN LVPRDIASRA AKERCDAGYG VGTSKLAVYL
DFAAAVERYG RAEANKNNIH NASEADIITW GKAVVKEKYG NLFDMYKQIT GEDPYEVPMR
IYPAVHYTMG GLWVDYNLMT TVPGLYSLGE ANFSDHGANR LGASALMQGL ADGYFVIPYT
IGAYLASEIR TGKISTDHEA FVKAEAEVKE RIDTLLRIQG KTSPELFHRR LGKIMWEKCG
MARNAEGLKE AIQEIRQLRR DFWSDVKVMG TANYFNPELD KANRVADFIE LGELMCIDAL
DRNESCGGHF REEYQTEEGE ALRDDENYMY VSAWEHKGPE NWELHKEELV YENIKIAQRS
YK
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