| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3962 |
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| Symbol | |
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| ID | 8227557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4809220 |
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| End bp | 4809948 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931803 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_003088331 |
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| Protein GI | 255037710 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGTAA TCGGTAAATA CTTCATTTTT TTAGGAACGC TGTTCGGGAA GGGCGAGAAA
TTATCGGTTT ACTGGCGGAG GCTGATGGAG GAATGCGTGG GCATCGGCGT GAGTTCGATC
TTTATCGTCG CGATCGTTTC CACATTTATC GGCGCAGTTT CGTGTATTCA AACAGCCTAC
AACCTCGTGA GCCCCATTAT CCCCATTTCC ACCGTGGCAT TGATCGTCCG TGACATGGAA
ATCCTCGAAC TCGCGCCTAC CATTACCTGT ATCGTTCTCG CCGGGAAGGT GGGTTCCAAC
ATTGCCAGCG AGCTGGGCAC GATGCGCATT ACCGAGCAAA TCGACGCGTT GGAGGTAATG
GGGATTAATT CGTCGTCCTA CCTCGTGCTT CCGAAAGTCG TCGCGGCGAT GCTCACATTC
CCGATGCTTG TAATATTTTC CGCATTTCTG GGCATTCTGG GCGGATATTT GGCAGGTACA
CTAACGGGCG TGATCACCGA ACGCGATTAT CTCTACGGCA TCCGCGACTC GTTTGTGCCT
TACAACATCT TTTTTATGTG TGTGAAACCC TTCGTTTTCG GCTTCCTCAT CGCCTCCATT
TCCTCGTTCA AGGGATTTTT TACGTCGGGT GGTGCGTTGG AAGTGGGTAA AGCCAGCACA
CAAGCCGTTA CCAACAGCTG TATTTCGATT CTGGTGGCCG ATTACCTGCT TGCACAGCTG
CTTTTGTAA
|
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| Protein sequence | MSVIGKYFIF LGTLFGKGEK LSVYWRRLME ECVGIGVSSI FIVAIVSTFI GAVSCIQTAY
NLVSPIIPIS TVALIVRDME ILELAPTITC IVLAGKVGSN IASELGTMRI TEQIDALEVM
GINSSSYLVL PKVVAAMLTF PMLVIFSAFL GILGGYLAGT LTGVITERDY LYGIRDSFVP
YNIFFMCVKP FVFGFLIASI SSFKGFFTSG GALEVGKAST QAVTNSCISI LVADYLLAQL
LL
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