Gene Dfer_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3953 
Symbol 
ID8227548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4799885 
End bp4800373 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content50% 
IMG OID644931794 
ProductThioredoxin domain 
Protein accessionYP_003088322 
Protein GI255037701 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGA AAATGAAAAG TTTGAAGAAT CTCGGATTTG CAATGGCTGC GCTGATGCTC 
GCCATGTCGG TTGCAACGGC CGGGGAAGGG GATAAAAAAG CCACCGCTGC GTCGACAATC
GCAGCCGATA AAGGCATTCA GTTCACGGAA GCCAAGTGGG CGGAAATTTT GAAGCAAGCC
AAAAAGGAGA ACAAGCTGAT CTTCCTCGAC GCTTATACTA CCTGGTGCGG CCCGTGCAAG
CTTTTGCAAA AGAACGTCTT CACACGCGAC GACGTCGCCG CGACTTTCAA TGGTAATTTC
ATCAATGTGA AAATAGACAT GGAGAGCGGC GAAGGTCCGG CGCTAACCAA AAAATATCCG
ATAGAAGGTT ATCCCACCTT GTTTTTCATT AATTCAAAAG GCAAAGTGGT GAAACAGCTG
CTGGGCTACC AGCAGCCTGC CGACCTGATC AAGGCGGCCA AGGCGGTGCA GAAGGGGCCA
ACTAGCTAA
 
Protein sequence
MSLKMKSLKN LGFAMAALML AMSVATAGEG DKKATAASTI AADKGIQFTE AKWAEILKQA 
KKENKLIFLD AYTTWCGPCK LLQKNVFTRD DVAATFNGNF INVKIDMESG EGPALTKKYP
IEGYPTLFFI NSKGKVVKQL LGYQQPADLI KAAKAVQKGP TS