Gene Dfer_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3924 
Symbol 
ID8227519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4771551 
End bp4772225 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content56% 
IMG OID644931765 
ProductPeptidase M23 
Protein accessionYP_003088293 
Protein GI255037672 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC TCGCCCGCCT GTTTCGCGAA CATCCTTACT TTGCGCCTGT TGTGCAAAAC 
GGCAAACCGT ATCGCCGGCT TGACTTTACG GCCCGGAACA GCGAGCTGCT CGCGCGGGAT
TTATCCGAAA CCTCCGATTT TACTGATTAT GTGTTTAACG AGCTGCTTTC AGGAAATAGC
TGCAACGGCG TTGGGGGCTA CGGCGAGGAC CGGGTGATTT ACCGGCAGCG CAAGCACTTC
ACAGCCGATG CGGAAAAGCC CCGAAGTATT CATTTGGGCA TTGATATCTG GACGGACGCC
GGAACGCCGC TCCACGCTCC CCTGGACGGA ACGGTGCACA GTTTCGCATT CAACAACCAT
TACGGAGACT ACGGCCCGAC GATCATCCTC GCGCACGAGC TCGCCGGAAC GCGGTTTTTC
ACACTCTACG GTCACTTGTC GCTCAGCTCG TTGGAAGGCC TGGAAGCGGG CAAAGTCATC
AAATCCGGCG AACGCTTCGC CGAAATCGGC CCGTACCCGG AAAACGGCCA TTGGCCCCCG
CATCTGCATT TCCAGGTGAT CAGCGACATC GGCAACCACC ACGGAGATTT CCCCGGCGTT
TGCCATACAG AAGATCGGGA TTATTATTTA GGCTTATGCC CTGATCCTGG CTTGATTTTG
AGGATCGCCT ATTGA
 
Protein sequence
MPELARLFRE HPYFAPVVQN GKPYRRLDFT ARNSELLARD LSETSDFTDY VFNELLSGNS 
CNGVGGYGED RVIYRQRKHF TADAEKPRSI HLGIDIWTDA GTPLHAPLDG TVHSFAFNNH
YGDYGPTIIL AHELAGTRFF TLYGHLSLSS LEGLEAGKVI KSGERFAEIG PYPENGHWPP
HLHFQVISDI GNHHGDFPGV CHTEDRDYYL GLCPDPGLIL RIAY