Gene Dfer_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3912 
Symbol 
ID8227507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4757167 
End bp4757859 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID644931753 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003088281 
Protein GI255037660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.703578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCAA AAACCATGAA GGCATATCTG ATATGCCTTT TTCTTTTGCT CCAAATTCTT 
CCGCAGGCCG CATTCGCGCA GGAAGATTCT GTCAAACTCT GGAAGGTTAC AGCGGGAGAT
ATAATACCGC CGGTGACGCT CGGATTGGCT GCATTTGTGG TTCAGGGGAA GATCAGCCGG
CAATTGCAGG AACACGTCAC TTCCAGATAT CCCGATTACC GCACCAAAGT GGACGATTAC
CTCGTCTACG CGCCCGGTGT GGTGAGCCTC GGACTTGCCT CGGCCGGAGT AAAGGGCCGC
CACAAGCTCG GCGACCAGGT GATCCTGGCA TTGCTCTCCA ACATCATCGC GCAGGGCGTA
ACGCAGGGGT TTAAAAGGAT TTCACAATAC CCGCGCCCGA ACGGCGAGGA TAATCACTCG
TTCCCATCGG GGCATAGCAC CACGGCATTC GCCAATGCGA CGATCCTGCA CGAAGAGTAC
GGGCATCGCA GCATATTATA TAGCATAGGC GGCTACGGGA CGGCCACGGC CGCAGGAACC
ATGCGCGTAC TCGGCAATCA CCACTGGCTC GCGGATGTGC TGATGGGTGC GGGAATTGGC
ATAGGCGCCA CAAAGCTCGT GTACATCAGC TACCCCTGGA TGCAAAAGCA GGTGCGGAGG
ATAAAAGCAC GGCGACACAG CGAAAAAAAT TAA
 
Protein sequence
MIPKTMKAYL ICLFLLLQIL PQAAFAQEDS VKLWKVTAGD IIPPVTLGLA AFVVQGKISR 
QLQEHVTSRY PDYRTKVDDY LVYAPGVVSL GLASAGVKGR HKLGDQVILA LLSNIIAQGV
TQGFKRISQY PRPNGEDNHS FPSGHSTTAF ANATILHEEY GHRSILYSIG GYGTATAAGT
MRVLGNHHWL ADVLMGAGIG IGATKLVYIS YPWMQKQVRR IKARRHSEKN