| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3906 |
|---|
| Symbol | cysS |
|---|
| ID | 8227501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4752125 |
|---|
| End bp | 4753627 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644931747 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_003088275 |
|---|
| Protein GI | 255037654 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0469019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC AAACTTTCCA GCCACTTAAA ATATTCAATA CGCTTACCCG TAAAAAGGAT
GTTTTCGTTC CCATTGCGCC TCCGTATGTC GGCATGTATG TGTGCGGGCC GACCGTTTAT
AACAATGTGC ATTTAGGCAA CATCCGCACG TTTCTCTCTT TCGATATCCT GTTCCGCTAC
CTGACGCACA TCGGTTACAA AGTGCGCTAC GTCCGCAATA TCACCGACGT GGGCCACCTG
GTAGGCGACG GCGACGAAGG GGAAGACAAA ATCGGGAAAA TGGCCAAGCT CCAGAAGCTG
GAACCGATGG AGATCGTGCA ACGCTATACC AATGATTTTC ATGAAGTCAC AGCCGTTTTC
AACCTCCTTT CCCCCAGCAT CGAACCAACG GCAACAGGAC ATTTGATCGA ACAGATCGAA
GCCGTGGAGG CGCTGATCGA GAAAGGCGTC GCTTACGAGT CCAACGGCTC CGTGTATTTC
GATATCAACA AATACCAGGC AGGCGGCAAT GAATACGGCA AGCTGTCCGG GCGCATTATT
GAGGACCTCC TCAACGAAAC CCGCGATCTC GACGGTCAGG CCGAAAAGCG CAACCCGCTC
GATTTTGCAT TGTGGAAAAA AGCCAGTCCT GAGCACATTA TGCAATGGGA ATCGCCCTGG
GGCAAAGGCT TCCCCGGCTG GCATTTGGAA TGTACTTGCA TGAGTGCCAA ATACTTAGGC
AAACAATTCG ACATTCATGG CGGTGGTATG GACTTGAAAT TCCCTCACCA CGAATGCGAG
ATCGCGCAGG GCAAATCGCT CACCGGCGAA GAACCGGTGC GCTACTGGAT GCATACCAAC
ATGCTCACCG TCAACGGACA GAAAATGTCG AAATCGCTCG GCAACTCGTT CCTTCCGGCC
GAACTGTTTT CCGGCAACCA TGAGTTGCTC GAACAGGCGT ACAGCCCGAT GACCGTGCGT
TTTTTCATGC TCCAAAGCCA GTACCGCAGC ACACTCGATT TTTCAAACGA CGCATTGAAA
GCCGCCCAAA AAGGCTACAA AAAGCTAGCA AACGGCCTGC GCCTCGCGAA AATGCTCACC
TACACGCATG AGGATGGCGT AAATGCGGAT GACGCGAAAA AAGCCGACAT TGAAAAGTCG
ATCGACGGGT TTTACAACGC CATGAACGAC GACCTGAACA CCGCCGTAGC ATTCGCGAAC
CTGTTCAACA TGTTGAAATA CATCAACATG CTCAATACAG GTCAGCTTAA ATCCGTCGCT
TTGGGTGAGG CTGTATTTAC TTCGCTGAAA GAAAAATTCG TGATTTTCTT CGAGGATGTG
CTCGGTTTGA AAGAAGAGCT CGCCGAAGGG CACGCGATCC TGGACGGAAT GCTGAAACTG
TACCGCGAAT TTAAACTCTC GCAGAACTAC GAAAAAGTGG ACGAAATCCG TTCTTATTTC
AAAAACCAGG GCCTGGTGAT CCGTGACACC AAGACCCGGA TCGATTGGGC TTACGAGGAA
TAA
|
|---|
| Protein sequence | MTAQTFQPLK IFNTLTRKKD VFVPIAPPYV GMYVCGPTVY NNVHLGNIRT FLSFDILFRY
LTHIGYKVRY VRNITDVGHL VGDGDEGEDK IGKMAKLQKL EPMEIVQRYT NDFHEVTAVF
NLLSPSIEPT ATGHLIEQIE AVEALIEKGV AYESNGSVYF DINKYQAGGN EYGKLSGRII
EDLLNETRDL DGQAEKRNPL DFALWKKASP EHIMQWESPW GKGFPGWHLE CTCMSAKYLG
KQFDIHGGGM DLKFPHHECE IAQGKSLTGE EPVRYWMHTN MLTVNGQKMS KSLGNSFLPA
ELFSGNHELL EQAYSPMTVR FFMLQSQYRS TLDFSNDALK AAQKGYKKLA NGLRLAKMLT
YTHEDGVNAD DAKKADIEKS IDGFYNAMND DLNTAVAFAN LFNMLKYINM LNTGQLKSVA
LGEAVFTSLK EKFVIFFEDV LGLKEELAEG HAILDGMLKL YREFKLSQNY EKVDEIRSYF
KNQGLVIRDT KTRIDWAYEE
|
|---|
| |