| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3870 |
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| Symbol | |
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| ID | 8227465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4708190 |
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| End bp | 4709458 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931711 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003088239 |
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| Protein GI | 255037618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.3843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT CTAAGTGGTT CATAGCAGCG ATCATACTTT TTACCCACAC CCTGACATTC
GCCTATTCCA GCGACATTCC GCCTGTTTCT GAGGAAAAGT ACGGCTACTT TTTAGATAAA
AATCACAAAA CGGCACGCAT CCCGTTCGAG CTGCATTCCA ACCTGATATT GATTTACGCC
AAGATCAACG ACAACGATTC CCTGCGTTTT ATCCTCGATA CGGGCGTCAG TTCCATTATC
ATTACCGATC CCCACGCCCT CAAAGCCGAC AAGCTGCGTT TAACCCGCAA AGTTAACCTC
ACCGGCGCAG GCGAAGGCGC ATCCATATCC GCACACGTCG CGATCGACAA CCGGTTTTCG
ATGGGCCGCC TCCGGGCCAA CCATCAGAAC ATCGTGATCC TTGAAGACGA TTTCCTGCGG
CTTTCCGAGT ACGTGGGCGT GCCGGTGCAC GGCATTTTTG GCTATGAAAT CTTTAACAAC
TTCGTGGTCA CCATTGATTT CGCGAAGAAG GAAATACTGC TCATGCGGCC CGACCGGTAC
CGCTATAAAA CCAGCAAAGG CGACAAACAT AAAATCGTGA TCGAGGATAC AAAGCCGTTT
ACCGATGCCG TAACGCTGTT CGCCGACGGC CGCGAGCATC CGATCCGCGT GCTGATCGAC
ACCGGTGCCG GCCATGCGCT GCTGCTCAAT AACTCTCCGA AAGAAACCTT CCGCCTGCCC
GAAAAAGTGA TCCGGGCGCA ATTGGGTCGT GGTTTGAATG GCGTGATCAA CGGTAACCTT
GGCCGGGTGG ACAAAATGCG GCTTGGCAGG TTTGAGCTTA ATAACGTGGT AGCATCGTTT
CCCGACAGCA TCGCATTCGG CTCCAAGCTG CGGGCGGGTG CCGAGCGGCA GGGGAACATC
GGTTGCGAAT TGCTGCGCCG TTTCAAGGTT ACATTCAATT ACCAGGAGCG ATACATGGTG
CTGAAACCGA TCAAAAGCCG CCTGCGCGAG AAATTCGAAC ACGATATGAG CGGAATGGAG
ATCCGCGCGG AAGGCCAGGA TTTGCGGTCC TACATTGTTA ACCACATTAT TGACGACTCG
CCGGCCGCAC GTGCCGGCCT GATGGAAGGC GACCAGCTGC TGTTTATCGA CGACCACTCC
GCCTCCGATC TCAATGTGAG TGAAATATAT AAGCTCATGC AGCGCGGCGA CGGCAAGAAT
ATCGACCTGC TCGTGAAACG CAAAGGCGAT ATTTTCTTTA CGCAGATCAC ACTGCGCAGG
ATGATTTAG
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| Protein sequence | MKTSKWFIAA IILFTHTLTF AYSSDIPPVS EEKYGYFLDK NHKTARIPFE LHSNLILIYA
KINDNDSLRF ILDTGVSSII ITDPHALKAD KLRLTRKVNL TGAGEGASIS AHVAIDNRFS
MGRLRANHQN IVILEDDFLR LSEYVGVPVH GIFGYEIFNN FVVTIDFAKK EILLMRPDRY
RYKTSKGDKH KIVIEDTKPF TDAVTLFADG REHPIRVLID TGAGHALLLN NSPKETFRLP
EKVIRAQLGR GLNGVINGNL GRVDKMRLGR FELNNVVASF PDSIAFGSKL RAGAERQGNI
GCELLRRFKV TFNYQERYMV LKPIKSRLRE KFEHDMSGME IRAEGQDLRS YIVNHIIDDS
PAARAGLMEG DQLLFIDDHS ASDLNVSEIY KLMQRGDGKN IDLLVKRKGD IFFTQITLRR
MI
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