Gene Dfer_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3836 
Symbol 
ID8227430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4674689 
End bp4675453 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID644931676 
Productglycosyl transferase family 2 
Protein accessionYP_003088205 
Protein GI255037584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.377937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAA GCGTCGTAAT ACCAGCATAT AACGAAGAAG AATCGATCAC ACACACGCTC 
GTATCATTAC ATAATACATT AAATAAGTAC AATATCCCCC ACGAAATCTG CGTCACCAAC
GACAATTCGA AGGATGGGAC ATTGCGCGTG CTGGACGAAC TTTCCCTTCA AATCCCTACC
CTCGTTTATT ACACCAATCC CGGCCCGAAC GGCTTCGGCT ACGCGGTGCG TTACGGGTTG
GAGCGCTTCA AAGGCGATTG CGTGGCCGTT TTCATGGCCG ATATGTCCGA TGATCCCGAG
GACCTTGTGA AGTTTTATCA CAAAATGCTG GAAGGCGATT ACGACTGCGT TTTCGGCTCA
CGGTGGGAAA AAGGCGGCAA GGTGATCGAC TATCCGGCAT TGAAAAAGGT GATCAACCGC
GTGGCGAATG CCATTGTACG CTTTGTAATG GGCATTAAAT ACAATGATAC TACCAATGCA
TTCAAGCTTT ACAAGCGTGA AACGATCGAG GGTATCAAGC CGTTTTTGGC GCCTCACTTC
AATCTGACAA TTGAACTTCC TCTGAAAGCG ATGGTGCGCG GCTACAACTA CGCCGTGGTA
CCCAATAGCT GGACCAACCG GAAATACGGC GAATCGAAGC TGAAAATCAA GGAAATGGGC
AGCCGGTACT TTTTTATATT GATGTATTGC CTTATTGAAA AGTACTTCTC ACAAGGTGAT
TTTATGAAGA AAACCACCGC GCCAAAGAAG GAAGTAAGCC GGTAA
 
Protein sequence
MKLSVVIPAY NEEESITHTL VSLHNTLNKY NIPHEICVTN DNSKDGTLRV LDELSLQIPT 
LVYYTNPGPN GFGYAVRYGL ERFKGDCVAV FMADMSDDPE DLVKFYHKML EGDYDCVFGS
RWEKGGKVID YPALKKVINR VANAIVRFVM GIKYNDTTNA FKLYKRETIE GIKPFLAPHF
NLTIELPLKA MVRGYNYAVV PNSWTNRKYG ESKLKIKEMG SRYFFILMYC LIEKYFSQGD
FMKKTTAPKK EVSR