Gene Dfer_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3803 
Symbol 
ID8227392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4630914 
End bp4631816 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content48% 
IMG OID644931638 
ProductMethyltransferase type 12 
Protein accessionYP_003088172 
Protein GI255037551 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.157905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.599602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAG AAACGCTTGA TAAATGCCCG GTATGCCAGC AATCCAGTTT CAGCAATTAC 
CTGAACGTGG AGGATTATAC CGTTTCGCAC AAAGAATTCA CGATCCAGCA ATGCAATTCC
TGTTACTTTC TGTTCACGAA TCCGCGCCCG TCCGAGGCTT CGATCGGAGC CTATTATGAA
TCGCAGGACT ACATTTCTCA TCACGACGAA GCCAAAGATC TGATGAGTAA AGTGTACACT
TCTGTAAGAA ATCATACGAT TGAACAGAAG GTAAAACTGA TCAACAGCCT TGTGAAACCA
AAGGGAACAT TGCTGGATAT CGGCTGCGGA ACGGGCAACT TTTTGAGCGC CGTGAAGCAG
GATGGCTGGA AAACATTCGG TACCGAGCCC GATTCCGGCG CCCGCGAAGT AGCAGCGAAG
CGGGTAGGAG CGACGATTTT TGAAGGCATT ACCGAAGAAA GTCTCGGAGC CCAGCAATAC
GATATCATTA CGATGTGGCA CGTTTTGGAA CACGTCCACA AATTGAATGA AACTATAGAC
TGGCTGCAAA ACCACTTAAA ACCGAACGGA CGGATCATCA TCGCGGTGCC TAACCCGCAG
TCGCACGACG CCGCTAAATA CGGCCGTTTT TGGGCCGCCT ACGACGTCCC GCGGCATTTG
TATCATTTCA CACGCGCCAC GATGAAAAAT CTCCTGCAAA GGCACGGATT GGCCGTTAAA
AAGATCCTTC CGATGTGGTT CGATTCCTTT TATGTGAGTA TGCTCAGCAC CAAATATAAA
AGCAGTAAAA CGAATCTCGT GGATAGTGTC GTCACCGGTC TGCAATCCAA CTTAAAAGGC
CGCGCCGGAA CGAATAAGGA ACTGAATACT TCCAGTCTGA TCTACATTAT TTCGAAAAAC
TGA
 
Protein sequence
MSLETLDKCP VCQQSSFSNY LNVEDYTVSH KEFTIQQCNS CYFLFTNPRP SEASIGAYYE 
SQDYISHHDE AKDLMSKVYT SVRNHTIEQK VKLINSLVKP KGTLLDIGCG TGNFLSAVKQ
DGWKTFGTEP DSGAREVAAK RVGATIFEGI TEESLGAQQY DIITMWHVLE HVHKLNETID
WLQNHLKPNG RIIIAVPNPQ SHDAAKYGRF WAAYDVPRHL YHFTRATMKN LLQRHGLAVK
KILPMWFDSF YVSMLSTKYK SSKTNLVDSV VTGLQSNLKG RAGTNKELNT SSLIYIISKN