| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3771 |
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| Symbol | |
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| ID | 8227357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4585161 |
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| End bp | 4587593 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931603 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003088140 |
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| Protein GI | 255037519 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGGA AAAAGAACTT CTTCAATTGC TTCCTGATCG TCGCCGCATT GCTCTCAACG
GCATTCCAGT GGTCGGATGA GGATTTTATT CAATTCATTA CCAATAAAAT AAATCAGTAC
CGAAACACAT TACCGGCTGA AAAGGCTTAC CTGCACCTGG ATAAGCCCTA CTACGCCACC
GGCGACACAC TGTGGTTCAA GGCTTATCTA ACGGAGGGGG CGCTCCACTT AGCCGACAGT
GCCAGCAACC TCCTCTACGT CGACCTCATC GAACAGCGCT CGGGCCGGAA TGCCGCATTA
AGGCGCGTGC AAATGAATGG CGGCACAGGC CACGGCGAGA TCGTCCTCAG CGATTCCCTC
GCGCCGGGCG CCTACACCAT TCGGGCGTAC ACCAACTGGA TGCGCAATTC GTCCGAAGAT
TTTTTCTTCC AAAAGAATGT ATATATGTTT GATTATAAAG ACAATGCATC TTCCAAAACA
GACAACAGTC CGATAGACCT GCAATTTTTC CCGGAAGGCG GGCAGCTCGT GGCCGACATC
AGCACCCGCG TCGCATTCAA AGCTGTGGAC GCCAGCGGAA TGGCCCGCGA CGTGGCCGGC
TTTGTGCTCG CCCAAAGCGG TGACACCGTA GGCTCATTCA AAAGCGAACA TGCAGGCATG
GGGCGCTTCC AGTTTGAGCC CAAAGCAGGA AAAACCTACA AGGCATTTGT GAGACAAGAA
GGCGGAAAAA CGACCCCCGT TCCGTTTCCG AAGGTACAGG ACTCCGGATT CACGATGCTG
GTGGACAATC TGTCAAATCC GCTTAAAATG AGGGTACTAG CCTACGCCAA AGTGCCCGGA
AAAACCGAAA TACCCGTGCG CGTGGTAGGT CATGCGCGGG GCATTGTCGC ATTTGTAGCC
AACGGCAAGA TCGGCAGCCG CGGACTGATG ATGCAGCTCC CCACCACCGA ACTGCCGGAC
GGCATTACAC ACCTCACCCT GTTCGACGAC ACCGGCAGGC CGGTCTGCGA GCGGTTGGTT
TTTATCAACC ATTCGAGAAG TCTGCGCGTG GAGGTCAAGC CGTCGAAACC CACCTATCAG
CCGCGTGAAA GAGTAGACGT AGCAGTAACC GTTACCGATT CGGCGGGCAA ACCTGTGGAA
GCCAGTCTCT CATTGGCTGT CACCGATGCC GGCCAGATCA CACAGCAGCC GCACGATCAG
AACATTGTTT CTTACCTGCT GTTATCATCT GATCTGAAAG GGTTTATTGA AAAACCTTCC
TACTACTTCG ACCCTGAACA ACCGAGTAGA AAAATCCACC TCGACTATCT GATGATGACC
CACGGCTGGA CGCGGTTCAA ATGGGACGAC GTGCTGCGCG ACTCCATTCC GCCTGCCAGG
CGCTACGTAG AGCAGGGCAT TACGCTGGAA GGCGACGTGA AGCGCAACAA CAAAAAGATC
ACTGAAAAAA CCGCACTTTC GCTTTACGTC AGCAACGACA GCCTCAGCAC GTTCATGACG
TCCGAAACCG ATGAAAACGG GCATTTCACC ATCTATAACC TGGCCTTCAC CGACTCGCTG
GAACTGCGTA TCCAGGGAAT GAATAAAAAA GGCAATCAAA ACCTCTCTTT CACGATCAAT
CCGTTTGAAC CGCCGCGGGC CTCGGTTGTT AAAATCCCGT TCAAACCCGT CACTGTGGAT
GCACAGCGAT TGGCCGATTT CCTGAAAAAT GCCGCCCAGG AACAGGAAAT CACACGAAAA
ATCCGTGAAA ACCGCGAAAG GCTGCTTCGC GAAGTGACCA TCAAGGCTAA AAAAGAAACC
CAGCGCGACG CACGTAAACT GTACAGCTCG GCCGATGCCA CGCTCAAAGT GACACCGCAG
CTGACTTCGG GCTACACCAG CGTGCTGGAC ATGATCCAGG GACGCATCGC AGGCGTATCG
GTCATGGGTT CGGGAATGAA TGCAACCGTA TCCATCCGCG GAAACAGGGG CGAGCCGCTT
TTCGTCCTCG ACGGCATGCC CGTGGACAAG GCACTGATCA CCTCCCTCAG CGTATTCGAC
GTTGAGTCGA TCGACGTTTT GAAGGGGCCG TCAGCCGCAA TTTTCGGCAG CAGAGGCGGA
AATGGGGTGA TTTCGGTGCT CACGAAGCGC GGAAACGCCA ATTACGATTA TTCGCAAGAC
ATTGTGCCCG GCGTGCTGGT CACGAAAATC GCGGGCTTCC ATACTCCCCG GGAGTTTTAC
GCACCCAAAT ACGGCCCCAC AGCCCCGCCA GCTCCTAATC CCGACTTCCG ATCGACGATT
TTCTGGGCAC CCATGCTCCG CACCGGCCCC GACGGAAAGG CCTCGGTGAG CTATTACCAT
TCCGATGCGA CGAGCCCGGC CGATATCCGG GTTGAGGTTT TGAGCCCGGG AGGATTGCCT
GGTTCGGGAA AAACAAGCTA TACCGTGAGA TAG
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| Protein sequence | MPWKKNFFNC FLIVAALLST AFQWSDEDFI QFITNKINQY RNTLPAEKAY LHLDKPYYAT
GDTLWFKAYL TEGALHLADS ASNLLYVDLI EQRSGRNAAL RRVQMNGGTG HGEIVLSDSL
APGAYTIRAY TNWMRNSSED FFFQKNVYMF DYKDNASSKT DNSPIDLQFF PEGGQLVADI
STRVAFKAVD ASGMARDVAG FVLAQSGDTV GSFKSEHAGM GRFQFEPKAG KTYKAFVRQE
GGKTTPVPFP KVQDSGFTML VDNLSNPLKM RVLAYAKVPG KTEIPVRVVG HARGIVAFVA
NGKIGSRGLM MQLPTTELPD GITHLTLFDD TGRPVCERLV FINHSRSLRV EVKPSKPTYQ
PRERVDVAVT VTDSAGKPVE ASLSLAVTDA GQITQQPHDQ NIVSYLLLSS DLKGFIEKPS
YYFDPEQPSR KIHLDYLMMT HGWTRFKWDD VLRDSIPPAR RYVEQGITLE GDVKRNNKKI
TEKTALSLYV SNDSLSTFMT SETDENGHFT IYNLAFTDSL ELRIQGMNKK GNQNLSFTIN
PFEPPRASVV KIPFKPVTVD AQRLADFLKN AAQEQEITRK IRENRERLLR EVTIKAKKET
QRDARKLYSS ADATLKVTPQ LTSGYTSVLD MIQGRIAGVS VMGSGMNATV SIRGNRGEPL
FVLDGMPVDK ALITSLSVFD VESIDVLKGP SAAIFGSRGG NGVISVLTKR GNANYDYSQD
IVPGVLVTKI AGFHTPREFY APKYGPTAPP APNPDFRSTI FWAPMLRTGP DGKASVSYYH
SDATSPADIR VEVLSPGGLP GSGKTSYTVR
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