| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3769 |
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| Symbol | |
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| ID | 8227355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4582848 |
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| End bp | 4583561 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931601 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_003088138 |
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| Protein GI | 255037517 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCA AGGAATTTTT AAAAAGGGGA TTTTCGGCAT TGGGACTGGC GGCAATCATT
CCGGTGATCA GCTGCTCGAA AGACACCGTC GACCCCGCAG ACACCTCGAC AGAAGCCGGC
TCTACACCGG GAAGCTGCAC ATTGACGGCG TCCGAAACAG CAGGGCCATT TCCGACCAAA
TCGCCGGCGA GCCTCGTCTC TAACGATATC ACGTCCGACC GGCCGGGCGC CAAGCTGAAT
GTGAAAATCA CGATTCAGAA TAAAAATAAC AGCTGCGAAG GCCTCGAAGG TGCTTTGGTG
GACATCTGGC ATTGCGATGC GGCCGGCAAC TATTCGGAAT ATGGCGGCAC TGGCATGCAA
TCGACCAATT ATACCAACCT CCATTTCCTC CGCGGCCGCC AGACGACCGA TGCCAGCGGC
CTGGTGACTT TCACGAGCAT TTACCCGGGC TGGTACTCCG GCCGTGCGAC GCACATTCAC
GTACACATAT ATAATGCAAG CGGAAAATCG TTATTGGTGA CCCAAATCGC TTTTCCGGAG
GAAATCAGCA AAGTGGTGTA CGCACAGGGC GCATATGCAA GCCACGGGCA GGCGGACACA
ACCAATGCGC GCGACAACGT TTTTGGCGAC GGCGTGAGCA CCGAAATGTC GACGGTGACC
GGCAATGTTT CGGCTGGTTA CGAACTCACG CATGCGATCG TGGTGAATGC CTAG
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| Protein sequence | MERKEFLKRG FSALGLAAII PVISCSKDTV DPADTSTEAG STPGSCTLTA SETAGPFPTK
SPASLVSNDI TSDRPGAKLN VKITIQNKNN SCEGLEGALV DIWHCDAAGN YSEYGGTGMQ
STNYTNLHFL RGRQTTDASG LVTFTSIYPG WYSGRATHIH VHIYNASGKS LLVTQIAFPE
EISKVVYAQG AYASHGQADT TNARDNVFGD GVSTEMSTVT GNVSAGYELT HAIVVNA
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