Gene Dfer_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3766 
Symbol 
ID8227352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4581340 
End bp4581756 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content41% 
IMG OID644931598 
Producthypothetical protein 
Protein accessionYP_003088135 
Protein GI255037514 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.44681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATAG TCATCGACAC AACAGACTAT ATCAGTGCCC TTATTGGAAA GACACATAGG 
GGTAAAGTTG AGTGTGTCCT CCTTCATGAA AATATAGAAG TCCTGGCTGA TGCCACACTT
CTAGAAGAAA TCTCCGAAGT AGCTTATCGC GATAAATTCC GAAAATACAT CACGATAGAA
GAAGCAGATC AATTTATCAG CACTTTGAAG CGGCGCTTAC GACCAATCTT AGTTACGTCA
ATTGTCGAAG TAAGTCCTGA TCCTAACGAC AACTTTATTC TTGAATTGGC CAAAGACGGT
CAGGCTGACT ACATTGTGAC GGGAGATAAA CGTGGGTTAT TAAACCTTGG GCATTTCGAA
GGCATTCCGA TTGTCCGGCT GCATGAATTT TTGGATATAA TCAAAGGTCA TCAGTAA
 
Protein sequence
MRIVIDTTDY ISALIGKTHR GKVECVLLHE NIEVLADATL LEEISEVAYR DKFRKYITIE 
EADQFISTLK RRLRPILVTS IVEVSPDPND NFILELAKDG QADYIVTGDK RGLLNLGHFE
GIPIVRLHEF LDIIKGHQ