| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3765 |
|---|
| Symbol | |
|---|
| ID | 8227351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4580930 |
|---|
| End bp | 4581331 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644931597 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_003088134 |
|---|
| Protein GI | 255037513 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTGGA TGTCCAGAGA AGTATGCGTA ATGAGTGGGA CGAAGATTCT GATTGATACA
AATATTGCTA TTAGCTTATT TAAAGGCGAT GACCGATTAG GGGCACTTTT ACAAGACAGA
GAGGCTTACG TGTCATTCGT TAGCGAATTG GAGTTGCTGG GCTATCACGC AATCTCCATA
GAAGAAGAAT CATGGGTGGA AATGTTTCTG GATGAATGTA ACATTATTGA CATTAATGCA
GGAATTAAAG AGCTCACGAC CTACGTCCGG CGGCAATACA ACTTCAAACT CCCCGACGCA
ATCATCGCTG CTACATCCAT TTTCCTGGGT GTTCCGCTAT TGTCAACCGA CGGTAATTTC
GATAGAGTTA AAGAGCTGAT CTTCATATTT TATCAGTCCT AA
|
|---|
| Protein sequence | MLWMSREVCV MSGTKILIDT NIAISLFKGD DRLGALLQDR EAYVSFVSEL ELLGYHAISI
EEESWVEMFL DECNIIDINA GIKELTTYVR RQYNFKLPDA IIAATSIFLG VPLLSTDGNF
DRVKELIFIF YQS
|
|---|
| |