Gene Dfer_3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3733 
Symbol 
ID8227318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4543451 
End bp4544668 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID644931565 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003088103 
Protein GI255037482 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.150314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.769724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CCATTCAATA CGAATACAAG CCCGAGCATT TCATCGCGTC GGCACCCACC 
AAATACAACT CCGAAAGCCT TCGTACAGAG GAAATGGTGC TCAATATGGG CCCGCAGCAC
CCGTCGACGC ACGGCGTACT TCGCCTCGAA GTGGTGACGG ACGGTGAGGT GGTGATAGAC
GTCGTGCCGC ATTTGGGATA CCTGCACCGC TGTTTCGAAA AGCACGCGGA ATCGCTGCCA
TTCAACCAGA TTATCCCTTA CGTGGATCGG ATGGATTACG TGGCGGCCAT GAACTCGGAA
CATGCTTATG TGATGGGCGT GGAGCGCATG CTGGGCATTG AAAACGATAT TCCGAAGCGC
GTGGAGTACA TCCGCGTGGT GGTGGCCGAG CTTAACCGGC TGGCCTCACA CTTTGTCGCG
CTCGGTACGT ACGCGATGGA CATTGGCGCG TACACGCCGT TCCTGTGGAT GATGCGCGAC
CGTGAGCAAA TCCTGCGCCT GCTCGAATGG ACGTGCGGCG CGCGGATGCT GTACAATTAT
ATCTGGATAG GTGGCTTGTT CTATGATCTG CCGGTCGGTT TCGAAGAACG TTGTGCGGAG
TTTATTAAAT ATCTGAAACC GAAGCTGATC GAATTGCAGC AGCTTGTGGT GGATAATAAG
ATATTTATTC AAAGAACCGC GAATGTAGGC GTGCTGCCTT TGGACGTCGC CATTAACTAT
GGCTGTACCG GTCCAATGCT CCGCGGTTCG GGTTTGAGAT ATGATTTAAG AAAAGTGGAC
GGCTATTCCG TTTACCCCGA GCTGGATTTT GAAATACCGA TCGGCGAAGG AAAACTGGGC
AAAGTGGGGG ATTGCTGGGA CCGCACCTGG GTGCGCGTGG TCGAATGCTG GGAATCGGTG
AAAATCATCG AGCAAAGCCT GGTGCAGTTG CAGGGAGATC ACAGAAGAAC CCGCGATTTT
GACCCGCAAG CGTTGGTTCC GAAGAAAATA AGGCCGAAAG CGATGGATTT CTACGTCCGC
GGCGAGAGCC CGAAAGGGGA GCTGGGCTTC TATTTCCGCA CCGACGGCCG CGCTGATATT
CCTGTTCGCT GCAAGGCGCG GGCTTGTTCA TTCAATAACC TTTCGGTAAT TGGTGAAATC
TCAAAAGGCG CATTGCTGGC CGATTTAGTC GCTGTAATCG GCTCGATCGA TGTTGTAATG
GGAGAGGTTG ACAGATAA
 
Protein sequence
MSNAIQYEYK PEHFIASAPT KYNSESLRTE EMVLNMGPQH PSTHGVLRLE VVTDGEVVID 
VVPHLGYLHR CFEKHAESLP FNQIIPYVDR MDYVAAMNSE HAYVMGVERM LGIENDIPKR
VEYIRVVVAE LNRLASHFVA LGTYAMDIGA YTPFLWMMRD REQILRLLEW TCGARMLYNY
IWIGGLFYDL PVGFEERCAE FIKYLKPKLI ELQQLVVDNK IFIQRTANVG VLPLDVAINY
GCTGPMLRGS GLRYDLRKVD GYSVYPELDF EIPIGEGKLG KVGDCWDRTW VRVVECWESV
KIIEQSLVQL QGDHRRTRDF DPQALVPKKI RPKAMDFYVR GESPKGELGF YFRTDGRADI
PVRCKARACS FNNLSVIGEI SKGALLADLV AVIGSIDVVM GEVDR