Gene Dfer_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3701 
Symbol 
ID8227286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4504256 
End bp4505737 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content57% 
IMG OID644931533 
Productprotein of unknown function DUF1501 
Protein accessionYP_003088071 
Protein GI255037450 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC TGTTAAAAGA ATTACAACAC GCGGAATTGC ACCGGCAAAC CCGCCGCCAT 
TTCCTGCAAT CGGCCGGTTT TGGACTGGGG GCATTGGGGC TGGGATCATT GCTCGGCTCT
TGCGGCTCGT CGAAGGCGGA TGCCATAGCC GGCTCGGCCG ATCCGCTGGC ATCGCCCGGT
ATCCCGCAAT TTGCACCCAA AGCCAAGCGC GTCATTTATA TCCACATGGC CGGCGCGCCG
TCGCAGCTCG AACTTTTCGA CTATAAGCCG GAGCTCGTCA AATACCACGG GAAAGACTGT
CCTGCGGAAT TTCTGGAAGG CAAAAAGTTC GCATTCATCC AGGGTGTGCC CAAAATGCTG
GGGCCACAGG GCCAATTCGG GCAATACGGC CAGTCGGGCG CTTGGCTATC CGATTACGTG
CCCTATCTGC AAACGGTCGC GGACGAAATT ACTTTCCTGA AAGCGATGCA TACCGACCAG
TTCAACCACG CTCCGGCTCA GCTGCTCCTG CACACCGGCA GCGCGCGGCT GGGACGCCCT
AGCCTGGGCG CCTGGGCAGT GTACGGGCTG GGTTCCGAAA ACCGCAACCT GCCGGGCTTC
ATCGTGCTTG CATCGGGAGG CCGGCAGCCC GACGCGGGCA AAAGCGTGTA CGGAAGTGGC
TTTCTGCCAT CGGTATACCA GGGCGTGCAA TGCCGCACCG GCGGCGACCC GGTGCTGTAC
GTGACCGATC CCAATGGCAT GAACAGGAAT ATCCGCAAGA AAACGATCGA AGCGATCAAT
GAGATCAACC GGCAGACTTA CGAGGACGTG CAGGACCCCG AGATCCTGAC GCGGATCAGC
CAGTATGAAA TGGCTTTCCG AATGCAGATG TCCGTGCCGG AGGTAATGGA TGTTTCGAAA
GAGCCGCAAT TTATTCTCGA TATGTATGGA GTGAAAGCAG GCGAAGGCAG CTTTGGTATG
AATTGCCTCC TGGCCCGGAA GCTCATTGAA AACGACGTTC GTTTCGTGCA GCTCTTCGAT
TGGGGCTGGG ATGGCCACGG TACCAACGCA ACCGACAACG TGGAAGGCGG CCTGCGCGGC
AAATGCGAGA TTTCCGACCG GCCTATTGCG GCGCTGATCA AGGACCTGAA AATGCGTGGC
TTACTGGAAG AAACGCTGGT GGTATTCGGT GCGGAATTCG GACGGACTCC CATGCAGGAA
AACCGCAATG GCGTGGTAAT GCCCTATATG GGCCGCGACC ACCACCTCGA AGCCTACACC
ATGTGGATGG CAGGCGGCGG CGTGAAGCGC GGATACAGCC ACGGCGAAAC CGACGAATTG
GGCTATTATG GCGTAAAAGA CCGCGTCCAC GTCTACGATT TGCAGGCAAC AATCCTGCAT
TTGATGGGTT TTGACCATGA AAAATTCACC TATCCGTTCC AGGGAAGGAA TTTCAGGCTT
ACAGACACCG AGGGTAAAGT TGTAAAAGAG GTAATTGCAT AA
 
Protein sequence
MEKLLKELQH AELHRQTRRH FLQSAGFGLG ALGLGSLLGS CGSSKADAIA GSADPLASPG 
IPQFAPKAKR VIYIHMAGAP SQLELFDYKP ELVKYHGKDC PAEFLEGKKF AFIQGVPKML
GPQGQFGQYG QSGAWLSDYV PYLQTVADEI TFLKAMHTDQ FNHAPAQLLL HTGSARLGRP
SLGAWAVYGL GSENRNLPGF IVLASGGRQP DAGKSVYGSG FLPSVYQGVQ CRTGGDPVLY
VTDPNGMNRN IRKKTIEAIN EINRQTYEDV QDPEILTRIS QYEMAFRMQM SVPEVMDVSK
EPQFILDMYG VKAGEGSFGM NCLLARKLIE NDVRFVQLFD WGWDGHGTNA TDNVEGGLRG
KCEISDRPIA ALIKDLKMRG LLEETLVVFG AEFGRTPMQE NRNGVVMPYM GRDHHLEAYT
MWMAGGGVKR GYSHGETDEL GYYGVKDRVH VYDLQATILH LMGFDHEKFT YPFQGRNFRL
TDTEGKVVKE VIA