| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3690 |
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| Symbol | ruvB |
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| ID | 8227275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4491523 |
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| End bp | 4492548 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931522 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003088060 |
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| Protein GI | 255037439 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.212033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGG ATTATCTGTC CGGAGATAAA GAAAACCTTT CCAATACCGA CAAAGACATT
GAACGTGCCT TGCGGCCTTT GTCTTTTGAA GATTTTACCG GGCAGGACAA AATTCTTGAA
AACCTGAGAA TATTCGTGCA GGCCGCACGC CAGCGCGGCG ATGCTCTGGA CCACGTGCTG
CTGCATGGCC CTCCGGGATT AGGCAAAACG ACTTTGTCGA ACATCATTGC CAACGAGCTC
GGCTCAGGTA TTAAAATCAC CTCCGGCCCG GTACTCGACA AGCCCAGCGA CCTGGCCGGG
CTACTCACCA ATTTGCAGGA GCACGACGTC CTTTTCATCG ACGAAATCCA CCGCTTGAAC
CCCATTGTCG AAGAATACCT CTACTCCGCG ATGGAAGATT ATAAAATCGA CATTATGCTC
GATAGCGGCC CGAATGCCCG CAGCATCCAG ATCGGCCTGA ACCCGTTCAC GCTTATCGGC
GCCACTACGC GGGCGGGTAT GCTCACATCG CCCTTGCGCG CGAGGTTCGG GATCAATGCG
CGGCTGGAAT ATTATGATGC GCAGTTGCTG TCGTCCATTC TGAAACGCTC TGCCTCCATC
CTTGGAACGC CGCTGGAAGA AGACGCGGCA TTCGAAATAG CCCGCCGGAG CCGCGGTACG
CCGCGTATTG CCAATAATTT GCTGAGAAGG ACCCGCGATT TTGCCCAGGT GAAAGGTAAT
GGGCGCATTA CCGTAGCCAT TGCCGAAATG GCATTACAAG CATTGGACGT GGACCAAAAC
GGCCTGGACG AAATGGACAA CCGCATTCTC AGCACCATTA TTCAGAAGTT CAAAGGCGGG
CCGGTGGGCT TATCTACCAT TGCTACGGCT TGCGGCGAGG AAGCCGACAC CATCGAGGAA
GTTTACGAGC CGTTCCTCAT TCAGGAAGGT TATATCAAAC GCACCTCACG TGGCCGTGAA
GTGACGGAAA AGGCATTCAG GCACCTTGGA ATCCTGCCTC GCCACCGCTC TGGCGAACTG
TTCTGA
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| Protein sequence | MRQDYLSGDK ENLSNTDKDI ERALRPLSFE DFTGQDKILE NLRIFVQAAR QRGDALDHVL
LHGPPGLGKT TLSNIIANEL GSGIKITSGP VLDKPSDLAG LLTNLQEHDV LFIDEIHRLN
PIVEEYLYSA MEDYKIDIML DSGPNARSIQ IGLNPFTLIG ATTRAGMLTS PLRARFGINA
RLEYYDAQLL SSILKRSASI LGTPLEEDAA FEIARRSRGT PRIANNLLRR TRDFAQVKGN
GRITVAIAEM ALQALDVDQN GLDEMDNRIL STIIQKFKGG PVGLSTIATA CGEEADTIEE
VYEPFLIQEG YIKRTSRGRE VTEKAFRHLG ILPRHRSGEL F
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