Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3689 |
Symbol | |
ID | 8227274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4488605 |
End bp | 4491421 |
Gene Length | 2817 bp |
Protein Length | 938 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931521 |
Product | PKD domain containing protein |
Protein accession | YP_003088059 |
Protein GI | 255037438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.222352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCG CGACATTTGC GGACGCAGCA ACGCCCTTTG AGGTGAAAGG GCAATGCATG CAGAATCCAG ATTGCGAAGC CGACTCAACT TCATTCCGGG ACCCCGTTAT TGACGCTGTC GCCTGGCGAT GGAATTTTGG GGACGGAAGC GCGACGGACA CCAGGCGAAA TCCGCAACAT TCCTACATGG CGCCCGGTAC TTACACGGTC ACCCTGGTAA GAACGCTCAA AAGCGGGGCA ACTGAGACAG TTTCACAGCC CGTACAAATC GGCGAGCTCC CTCCCGAATT TCAGGAATGG AAAATCGATA CCACCATTTG TAAAGGCGAC ACGCTGATCC TCGATCCTTA TCCCAGCGGA GCGCCAAGCG GCGCCAAATA TATCTGGTAC CCCAAAGGCG ATACTACTCA GACATTAAGG GTCGACAGTT CAGGCTGTTA TTCGGTCGAG GTGATTATGC CCAATGGCTG TAAAATCCAG AATCGGATCA ATGTCAAGAT CTGTATGGAG CCACAGGCGC AGGAAGGTTC CAAGTGGTAT TTCGGAGGAA ATGCGGGCCT GGATTTTTCC AATACTCCCC CCACACCATT GACGGATGGG AAGCTGAATA CACCCGAGGG GACCTCGTCC ATTGCCAATT CCAAGGGCCA GTTGCTTTTC TATTCGGACG GCATCAAGGT CTGGAACAAG AACGGGGATG AAATGACGTG CACGTTCGGG CCGTGCGCGC CGATGAAAGG CAGCCCGAAT TCCACGCAAT CGGTGCTCAT TGTGCCCCAG CCCACCTGCC GCGGCTGCGA GTATTTATAT AATGTATTCA CTACCACCGA CATTAATGGA GAAAAGCTGT TGACGGTAAG CGTAGTCGAT ATGCGCCGGA ACAATGGGTT AGGCCAGATT ATTGAGCAAA ACACAACGCT CCAACAACCT ACCACCGAAC GCATTGCCTC CGTCCGCAAC GACCGAGACA GCACTTACTG GGTTGTTTCG CACGATTACG GCACCAATAA ATTCCGCATT TTCCATGCTA CTACGGGCGG GCTCGTCGAA GTAAGCGCAC CCGAGCTGGG CATGGCGCAC GATAGCACGA ATAAAGCCGA GGGCTACATG AAATTCTCGT CGCCGGATAG CACCACAGGC GAGCGCCAAC TGGCTGTGGT AATTCCCGGC CCGGCACGCA ATTATGTGGA GCTGTTTAGT TTCAACGACT CCACGGGCAC GTTGACCTAC AAAAAAACGA TGGACCTCGG CCCCGCGCCG CCCATTGCCT ACGGGATCGA ATTCTCCCCG AGTGGCGAAA AAATGTACAT TTCGTTTCAG AGCGAGAACG GTACAAACTC CCTTTTGAAA CAATACGACC TCTCATTGCC CGATAGTCTG GTCATAGAAA CGGCCATTAC CATCGACAGT TCCGCCACCC AGAAATACGG CGCATTGCAG TTCGGGCCGG ATGGCCGTAT TTACATGGCC ATCGAGGGCA GCGAGTACCT GGCAACGATC GGCGAGCCGG AAGGAAACTC ATTAACAGGC GTCGACTACG AGCGCGACGG AGCCAATCTG GGCGGTAAAA AGAGCCAGCT TGGGCTACCG AACATGGTGC AGGACTTCAC GCAGGAATCC TCCGGGCCTG GATTTGAGGC CGACGGATTT TGTACGAATG AACCCACGCA GTTCCAGGCC AGCCCTATGT GTGATCCGAT AGAAGATAGC TACTCGTGGG ACTTCCTCGG TAATGGGTCG TTTACAGCTC CTTCCAAAAC GACGACCGCG ACGTACACTT ACACCCAGCC CGGCAAGTAC ATGGTAGCCA TGCGCGCTAC CAACAAATGT GCCGACACGA CGATCGTGCG GGAGATCACC ATTTACGAAA CGCCAGCCAA CATCGACCTA GGACCCGATA AGGACACTTG CGGGGCCTAT GTGCCGCTGG ATATGAAAGT GAATGCGGAA GTGTATGCGT GGATCAACCG CGGACGCGTC GTAGGCCGTG GACGGACTTA TAATGCCACT TCAACCGGCC GCTACATTGC CATCGCATTC AACGGCCCGC AGGGAGATTG CTACGCAGCA GACACCATCG AAATCACATT GCGCAAGCCG CCGGCCTTCT CCATCGGCCC GGATACGACA TTGTGCCGCG ACAGCTCCAT TGTTCTGCGC GTACAAAGCG ACCGCTGGAT CGAATACAAA TGGAGCACAG GGGAAGACAC CCGTGAAGTG ACCATTGGTC AGCCCGGGCA ATATAGCGTA GTAGTGAAAG ATCGCAACGA TTGCTACAAT TCGGACACCA TTCAGGTAGG CGAGCTGCCT TCGCCAATCC TCGGCCTGGC ACCCGAAAAC TTCATTTGTA TTCCGGATGG CCAATCTGTC ATTCTCGATG CCAACGGGCA AGGGCCGTAT CAATACCTGT GGCCGCACTC CGGCGATACC ACGCGGACGG TTACCGTCAA CCAGGAAGGG AAATATACCG TGCGAGCCAC GAATCAGGAG GGCTGCGTGA CGGAACAAAC TACCGACGTG GTCGATAAAT GCGAGCCGCG GTTCTTCATT CCAGATGCAT TCACGCCCGA CGGAGAAGGC CACAACGAGA TCCTTGAAGT TTTCGGCGCT TACTATACCA ACTTCTCTAT GCGGATTTAT AACCGTTGGG GCGAAGTTAT TTTCGCTACT ACCGACATAG AAGCGCGTTG GGACGGAACA TACAAGGGTT TGAAAGTACA GCCGGGCAGC TATCCGTATG TTGTTTCCTA CGAAGCCCTT TATTATCCCG AACGCAACCC TACCGTGAAG CGCGGGGCGG TGATGGTGAT CCGGTAA
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Protein sequence | MLAATFADAA TPFEVKGQCM QNPDCEADST SFRDPVIDAV AWRWNFGDGS ATDTRRNPQH SYMAPGTYTV TLVRTLKSGA TETVSQPVQI GELPPEFQEW KIDTTICKGD TLILDPYPSG APSGAKYIWY PKGDTTQTLR VDSSGCYSVE VIMPNGCKIQ NRINVKICME PQAQEGSKWY FGGNAGLDFS NTPPTPLTDG KLNTPEGTSS IANSKGQLLF YSDGIKVWNK NGDEMTCTFG PCAPMKGSPN STQSVLIVPQ PTCRGCEYLY NVFTTTDING EKLLTVSVVD MRRNNGLGQI IEQNTTLQQP TTERIASVRN DRDSTYWVVS HDYGTNKFRI FHATTGGLVE VSAPELGMAH DSTNKAEGYM KFSSPDSTTG ERQLAVVIPG PARNYVELFS FNDSTGTLTY KKTMDLGPAP PIAYGIEFSP SGEKMYISFQ SENGTNSLLK QYDLSLPDSL VIETAITIDS SATQKYGALQ FGPDGRIYMA IEGSEYLATI GEPEGNSLTG VDYERDGANL GGKKSQLGLP NMVQDFTQES SGPGFEADGF CTNEPTQFQA SPMCDPIEDS YSWDFLGNGS FTAPSKTTTA TYTYTQPGKY MVAMRATNKC ADTTIVREIT IYETPANIDL GPDKDTCGAY VPLDMKVNAE VYAWINRGRV VGRGRTYNAT STGRYIAIAF NGPQGDCYAA DTIEITLRKP PAFSIGPDTT LCRDSSIVLR VQSDRWIEYK WSTGEDTREV TIGQPGQYSV VVKDRNDCYN SDTIQVGELP SPILGLAPEN FICIPDGQSV ILDANGQGPY QYLWPHSGDT TRTVTVNQEG KYTVRATNQE GCVTEQTTDV VDKCEPRFFI PDAFTPDGEG HNEILEVFGA YYTNFSMRIY NRWGEVIFAT TDIEARWDGT YKGLKVQPGS YPYVVSYEAL YYPERNPTVK RGAVMVIR
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