Gene Dfer_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3670 
Symbol 
ID8227255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4468817 
End bp4469971 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content52% 
IMG OID644931502 
Productpyruvate carboxyltransferase 
Protein accessionYP_003088040 
Protein GI255037419 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0979499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.164371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATC GAGTTCAGAT CTTCGACACT ACTTTACGAG ACGGCGAGCA GGTTCCTGGC 
AGCCAATTGA CCACAGAAGA AAAAATCGTG GTAGCCACAC AACTCGAAAA GCTGGGGGTA
GATATTATCG AAGCCGGTTT TCCGGTTTCA AGTCCCGGAG ACTTTCGTTC TGTGGTAGAA
ATCTCCAAAG CGGTGCGCGA GCCGATCATT TGCGCGCTTT CGCGTGCAGT ACAGGGCGAT
ATCGACGCAG CTGCGGACGC CTTGAAGTAT GCACAGCGGG CACGAATCCA CACGGGTATC
GGTTCATCCG ACATTCACAT CCAGCATAAA TTCAATACGA CCCGCGAGAA AATTATCGAA
AGAGCAATTG CGGCTACGAA ATATGCTAAA TCGAAAGTAG AGGACGTAGA ATTTTACTGC
GAAGATGCAG GCCGTGCGGA TCTCGTTTTC CTTTCACAAC TGGTTGAAGC AGTAATCGGT
GCCGGCGCGA CGGTGGTAAA CATTCCTGAC ACAACAGGTT ACTGCCTGCC CGACGAGTAC
GGCAATAAAA TTAAACACAT TTTCGAACAC GTTTCGAATA TCCATAAAGC CACTATTTCC
ATCCACTGCC ACAACGACCT CGGTTTGGCA ACTGCCAACT CCATCGCGGG TATCAATGCA
GGCGCGCGCC AGGTAGAGGT GACGATCAAC GGAATTGGCG AGCGCGCCGG TAACACGTCG
CTCGAAGAAG TGGTAATGGC ATTGAAAGTG CACCAGGAAC TGGGCCTGGA AACGGGCATT
AACACGCAGC ACATTTACCC GACAAGCCAA TTGGTGTCGA AAATGATGCG TATGCAGGTG
CAAGCTAATA AGGCGATCGT GGGCCGCAAT GCATTCGCGC ATTCGTCGGG CATTCACCAG
GACGGCTTCC TGAAAAACAA CCTGAACTAC GAAATCATGA ACCCGCACGA TGTGGGTGTG
GATAAGTCGG ATATCGTGCT CACAGCCCGC AGTGGCCGCC ACGCATTGAA GCACCGCCTC
GAATTGCTGG GCTTCTCCTT CGAAAAGCCG GTGCTCGACG AGCTCTACAC ACGGTTCCTG
GAAGTAGCCG ATATTAAGAA AGAAGTGAAC GACGGTGACC TGGTTGAACT CGTGAAGACA
GCCGAAGCGG TTTAA
 
Protein sequence
MSNRVQIFDT TLRDGEQVPG SQLTTEEKIV VATQLEKLGV DIIEAGFPVS SPGDFRSVVE 
ISKAVREPII CALSRAVQGD IDAAADALKY AQRARIHTGI GSSDIHIQHK FNTTREKIIE
RAIAATKYAK SKVEDVEFYC EDAGRADLVF LSQLVEAVIG AGATVVNIPD TTGYCLPDEY
GNKIKHIFEH VSNIHKATIS IHCHNDLGLA TANSIAGINA GARQVEVTIN GIGERAGNTS
LEEVVMALKV HQELGLETGI NTQHIYPTSQ LVSKMMRMQV QANKAIVGRN AFAHSSGIHQ
DGFLKNNLNY EIMNPHDVGV DKSDIVLTAR SGRHALKHRL ELLGFSFEKP VLDELYTRFL
EVADIKKEVN DGDLVELVKT AEAV