Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3670 |
Symbol | |
ID | 8227255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4468817 |
End bp | 4469971 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931502 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_003088040 |
Protein GI | 255037419 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0979499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.164371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATC GAGTTCAGAT CTTCGACACT ACTTTACGAG ACGGCGAGCA GGTTCCTGGC AGCCAATTGA CCACAGAAGA AAAAATCGTG GTAGCCACAC AACTCGAAAA GCTGGGGGTA GATATTATCG AAGCCGGTTT TCCGGTTTCA AGTCCCGGAG ACTTTCGTTC TGTGGTAGAA ATCTCCAAAG CGGTGCGCGA GCCGATCATT TGCGCGCTTT CGCGTGCAGT ACAGGGCGAT ATCGACGCAG CTGCGGACGC CTTGAAGTAT GCACAGCGGG CACGAATCCA CACGGGTATC GGTTCATCCG ACATTCACAT CCAGCATAAA TTCAATACGA CCCGCGAGAA AATTATCGAA AGAGCAATTG CGGCTACGAA ATATGCTAAA TCGAAAGTAG AGGACGTAGA ATTTTACTGC GAAGATGCAG GCCGTGCGGA TCTCGTTTTC CTTTCACAAC TGGTTGAAGC AGTAATCGGT GCCGGCGCGA CGGTGGTAAA CATTCCTGAC ACAACAGGTT ACTGCCTGCC CGACGAGTAC GGCAATAAAA TTAAACACAT TTTCGAACAC GTTTCGAATA TCCATAAAGC CACTATTTCC ATCCACTGCC ACAACGACCT CGGTTTGGCA ACTGCCAACT CCATCGCGGG TATCAATGCA GGCGCGCGCC AGGTAGAGGT GACGATCAAC GGAATTGGCG AGCGCGCCGG TAACACGTCG CTCGAAGAAG TGGTAATGGC ATTGAAAGTG CACCAGGAAC TGGGCCTGGA AACGGGCATT AACACGCAGC ACATTTACCC GACAAGCCAA TTGGTGTCGA AAATGATGCG TATGCAGGTG CAAGCTAATA AGGCGATCGT GGGCCGCAAT GCATTCGCGC ATTCGTCGGG CATTCACCAG GACGGCTTCC TGAAAAACAA CCTGAACTAC GAAATCATGA ACCCGCACGA TGTGGGTGTG GATAAGTCGG ATATCGTGCT CACAGCCCGC AGTGGCCGCC ACGCATTGAA GCACCGCCTC GAATTGCTGG GCTTCTCCTT CGAAAAGCCG GTGCTCGACG AGCTCTACAC ACGGTTCCTG GAAGTAGCCG ATATTAAGAA AGAAGTGAAC GACGGTGACC TGGTTGAACT CGTGAAGACA GCCGAAGCGG TTTAA
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Protein sequence | MSNRVQIFDT TLRDGEQVPG SQLTTEEKIV VATQLEKLGV DIIEAGFPVS SPGDFRSVVE ISKAVREPII CALSRAVQGD IDAAADALKY AQRARIHTGI GSSDIHIQHK FNTTREKIIE RAIAATKYAK SKVEDVEFYC EDAGRADLVF LSQLVEAVIG AGATVVNIPD TTGYCLPDEY GNKIKHIFEH VSNIHKATIS IHCHNDLGLA TANSIAGINA GARQVEVTIN GIGERAGNTS LEEVVMALKV HQELGLETGI NTQHIYPTSQ LVSKMMRMQV QANKAIVGRN AFAHSSGIHQ DGFLKNNLNY EIMNPHDVGV DKSDIVLTAR SGRHALKHRL ELLGFSFEKP VLDELYTRFL EVADIKKEVN DGDLVELVKT AEAV
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