| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3660 |
|---|
| Symbol | |
|---|
| ID | 8227245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4459463 |
|---|
| End bp | 4460584 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644931492 |
|---|
| Product | putative glycosyltransferase |
|---|
| Protein accession | YP_003088030 |
|---|
| Protein GI | 255037409 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.359283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0742075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCC TTTTTCTCGT TCAGGGAGAA GGCCGCGGGC ATTTGACACA AGCCATTTCG
CTCGGCCAGA TCCTGCGTGG CGCAGGGCAC AAAGTGGTGG GCGCGATGGT AGGAACATCG
CCGGGCCGGA ATATCCCTTC ATTTTTCCAC GAGCAGATTT TTGCCCCCGT GCATCATTTT
GCCGCGCCTA ATATCATTTA TAAAGCACAC GGCGGCGGCA TGAACGTGGG CCGCACTATT
GCCAAACATC TGGCACATTT GCCCAAATAC CTGAAAAGCC TGCATCGCAT TCACGAAACC
GTCCGGCAAA TCAATCCAGA CCTGATCGTG AGCTTTTACG ACACTTATGG CGGGTTATAC
AATACGATTT ACCGCTCGGG CATACCGATG ATCTGCATCG CGCATCAGTA CCTGCTGCTA
CACCCGAAGT TCGTATTCCC GGAAAACAGC AGGCTTAACC GGTTCCTCAT CAATCTCAAC
TCCAAATCGA CTTCGTGGCT TTCGGCGAAA CGGCTTGCAT TATCGTTCCG CGAAATTCCG
TCGGCGCCGG AACTCAAAAT CAGCGTCTTG CCGCCATTAC TCCGCAAGGA AGTCACCCGT
CTGACGCCGC AGAACGGCGC GTTCATCCTC GTGTACATGA CGCACCATAG CCTGAGCAAG
CAGGTGATCA ACTGGCATTT GAAGCACCAG GAAGTGGAGC TGCATTGCTT CTGGGACAAC
CCGGACGCTT CCGAAGAATT TACCTTCGAC AGTACCCTTA CTTTCCACCA GATCAACAGC
GAAAAATACC TGCGCATGCT CGCAACCTGC CGTGCGCTCG TCACGACAGC CGGTTTCGAA
TCGGTGTGTG AGGCGATGTA CCTCGGCAAG CCGGTCATGA TGGTGCCCGT TCCCAACCAT
TTTGAGCAGG AATGCAATGC CATCGACGGC GTAATATCCG GCGCAGGTGT CATGTCCCGG
TCGTTCGACC TTTCGGTGAT CTTCGATTAT CTTCCTAAGC ACATCGACCA ATCGGCGAAG
TTCCGAGCCT GGTACAACTG CGGACAGGAA ATGTTTGTAA AGGAGATTGG GGAGTTTGAA
AAATCGATCG ATATGCGGCG GAAAATGCAG TCGGAGATCT GA
|
|---|
| Protein sequence | MRILFLVQGE GRGHLTQAIS LGQILRGAGH KVVGAMVGTS PGRNIPSFFH EQIFAPVHHF
AAPNIIYKAH GGGMNVGRTI AKHLAHLPKY LKSLHRIHET VRQINPDLIV SFYDTYGGLY
NTIYRSGIPM ICIAHQYLLL HPKFVFPENS RLNRFLINLN SKSTSWLSAK RLALSFREIP
SAPELKISVL PPLLRKEVTR LTPQNGAFIL VYMTHHSLSK QVINWHLKHQ EVELHCFWDN
PDASEEFTFD STLTFHQINS EKYLRMLATC RALVTTAGFE SVCEAMYLGK PVMMVPVPNH
FEQECNAIDG VISGAGVMSR SFDLSVIFDY LPKHIDQSAK FRAWYNCGQE MFVKEIGEFE
KSIDMRRKMQ SEI
|
|---|
| |