Gene Dfer_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3652 
Symbol 
ID8227237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4450140 
End bp4451123 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content54% 
IMG OID644931484 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_003088022 
Protein GI255037401 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0241696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT TATCTCGTCG TCCCCGACGC AATAGAAAAT CCGCAGGTGT GCGTGACCTT 
GTTCAGGAAA CCAATTTGCA GGTGTCCGAT TTCATTTATC CTATGTTCGT CGTGGATGGA
ACGCGGCAGA AGTCGGAGGT GAAATCGATG CCCGGCATTT TCCGCTATTC GCTCGATAAC
CTGCTCGAAG AGCTCAAAGC TGTAACCGAT CTCGGGATCA GGGCCATTGA TCTTTTCCCG
AATTACCCCG AAAGCAAAAA AGACCGTTAC GCGTCCGAGA GCTTCCACGA AGATACATTT
TACCTGAAAG CCATTACGGC GATTAAGGAA ACGTTCCCCG AGTTGGTGAT CATGACCGAC
GTGGCTATGG ACCCTTACAG CTCCGACGGC CACGACGGGC TTGTCGAAAA CGGCAGGATT
TTGAACGACG CCACACTCGA AATCCTGGCG AATATGTCGC TCGCGCAGGC CAAAGCCGGT
GCCGATATTC TCGGGCCGAG CGATATGATG GACGGCCGCG TGGGCTACAT CCGCAGGCAT
CTCGATTCGC ACGGCTTTAC CGACGTGAGC ATCATGTCCT ATTCGGCCAA ATATGCCAGT
GCATTCTACG GCCCGTTCCG CGACGCGCTC GAATCGGCGC CGAAATTCGG GGATAAGAAA
ACCTACCAGA TGAATCCCGC CAACAAGCGC GAAGCCCTGC TGGAAGCGCA GCTGGATTTT
GAAGAAGGTG CGGATATGCT GATGGTCAAA CCGGCATTGT CGTACCTGGA CATTATCCGC
CTGCTCGACG AAAACTTCAA TATTCCCATC GCCGCCTACA ACGTATCAGG CGAATATGCA
ATGGTGAAAG CAGCGGCCCA AAACGGCTGG CTTGATGGCG AGCGTGCCAT GATGGAGGTG
CTCACTAGCA TCCGCCGTGC GGGCGCCAAA TGCATTCTGA CCTATTTCGC GAAAGAAGCC
GCCGTGATAC TGAACAAACG GTAG
 
Protein sequence
MIELSRRPRR NRKSAGVRDL VQETNLQVSD FIYPMFVVDG TRQKSEVKSM PGIFRYSLDN 
LLEELKAVTD LGIRAIDLFP NYPESKKDRY ASESFHEDTF YLKAITAIKE TFPELVIMTD
VAMDPYSSDG HDGLVENGRI LNDATLEILA NMSLAQAKAG ADILGPSDMM DGRVGYIRRH
LDSHGFTDVS IMSYSAKYAS AFYGPFRDAL ESAPKFGDKK TYQMNPANKR EALLEAQLDF
EEGADMLMVK PALSYLDIIR LLDENFNIPI AAYNVSGEYA MVKAAAQNGW LDGERAMMEV
LTSIRRAGAK CILTYFAKEA AVILNKR