Gene Dfer_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3650 
Symbol 
ID8227235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4448042 
End bp4449061 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content55% 
IMG OID644931482 
Producthypothetical protein 
Protein accessionYP_003088020 
Protein GI255037399 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0754933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAT TCATCCTTTG GGTTGCCGCG ATCCTCGTGA TCCTCGGTGT CGTATTCCTG 
GCCGGGCCAA AAGTGCCGGA AGCACGTCTT ACGCCTGTTT TGCCCACCGT AGCCACTGAC
CTTTCCGAGC TGGAAGAGGA AATAAACCGC ACCGAAAAGG CCACGCCAAT GCTCAAACCC
GACAATGAGG CGCGTATTGT GTGGGCTAAC GACAGTTTGA AGCAAAAAAC AACGTACAGC
ATCGTGTACA TCCACGGCTT CGGCGCCAGC TGGGCAGAGG GCGATCCCGT TCACAAAGAC
CTCGCAAAAC GATACGGAGC GAATCTTTAC CTCTCACGTA TGCACGATGC CGGTATCGCC
GACACGAATG CATTCGACGA CCTCACGCCC GCCAATTTCC TCGCCGGAGC GAAAAGGGCC
TTGGCCATCG GAAAGGTATT GGGCGACAGC GTGATCGTAA TCGGTACTTC GGCCGGCGGG
TTGCTATCCG TGTACCTGGC CGCAACTCAT CCGGAAATCA AGGGTTTGGT ACTCTATTCG
CCCTGCATGG CCATTGCCAA CCCGGCCATG AAGCTCATCA CGGGCCCCTG GGGCCAGCAG
ATCCTGCATA ATGTAATGGG CACGCACAAC ATGGGCAAGG ACTCGATTCC CGATCAGGCG
CAGTTCTGGT TGCAGGGCTA TCATACCAAC GGCCTCACCA CGTTGCAGCA GATGGTGGAC
GCCATTGCCA GGCCGGAAAT TTACCGGGAG ATCAAAATGC CGGTATTTGT AGGGTATTAT
TATAAAAATG AAGACGAGCA GGACAAAGTG GTGTCCGTAA AGGCGATCCG CAAGATGTAC
GAAGGACTGG GGACGGCGGC GGCTCAGAAA GAAGAAAAAG CATTTCCGGA AAGCGGCGAC
CATGTGATCG CGTCACGGCT CAGGTCGAAG GACGTAAAGG GTGTGTACGA GGCCACAGAC
CGGTTTTTTC AGGAAAAGCT GCACATGAAA CCAGTAGAAA TGCCTGTTGC CCAGCCTTGA
 
Protein sequence
MLKFILWVAA ILVILGVVFL AGPKVPEARL TPVLPTVATD LSELEEEINR TEKATPMLKP 
DNEARIVWAN DSLKQKTTYS IVYIHGFGAS WAEGDPVHKD LAKRYGANLY LSRMHDAGIA
DTNAFDDLTP ANFLAGAKRA LAIGKVLGDS VIVIGTSAGG LLSVYLAATH PEIKGLVLYS
PCMAIANPAM KLITGPWGQQ ILHNVMGTHN MGKDSIPDQA QFWLQGYHTN GLTTLQQMVD
AIARPEIYRE IKMPVFVGYY YKNEDEQDKV VSVKAIRKMY EGLGTAAAQK EEKAFPESGD
HVIASRLRSK DVKGVYEATD RFFQEKLHMK PVEMPVAQP