| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3640 |
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| Symbol | |
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| ID | 8227225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4437198 |
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| End bp | 4438232 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931472 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003088010 |
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| Protein GI | 255037389 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.280061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGT CAGTAGTAAT TGCGCCGATA AGCGAGAGCT TACCGGATTT TTTGAGTTCA
AAACAGTATT CAAAAATTGT AGTAATAGCC GATAACAACA CCAAAAGGCA TTGTTATCCG
ATTTTGAAAG CGGTTTTGCC GAAACATAGT GTAGTGACCG TTCCCAGCGG CGAAGCGCAC
AAGACGCTCG CGACGTGTGA GAAAATCTGG GAGGCCATGA CCAGAGACGA GCTCGACCGC
CATGCATTGG TGATCAATGT GGGCGGCGGG GTGATCGGCG ATATGGGTGG TTTTTGCGCG
GCGGTTTACA AGCGTGGAAT AGATTTTATC CAAGTGCCCA CGACTTTGCT TTCGCAGGTG
GATGCGAGTG TGGGAGGAAA GTTGGGGATT GATTTCCAGG GTTTCAAAAA CCATCTGGGC
GTTTTCAACA TCCCAAATAG CGTGCTCATC GACCCGGTGT TTTTGCAAAC ATTGCCGGAA
CGTGAAATAC GCTCCGGGTT CGCGGAGATC ATCAAGCATT GCCTCATCGC CGATGGTGTG
AAATGGCAGG AAATCCGTGC GAAGGATTTT GAAAGGCAGA ACTGGCCCGA CCTGATCGCG
CATTCGGTGC AGATTAAGCA GCAGGTGGTG GATCAGGACC CGACGGAAAA AGGGCTGCGG
AAGATCCTGA ATTTCGGGCA CACGCTAGGC CATGCGGTGG AGACGTGCTT CTTGAATAAA
TCGCCCAAAG AGCGGCTTTT CCACGGAGAA GCCATTGCGG TGGGGATGAT TATGGAAGCA
TATCTGTCGT TTGAGCGAAA GATGATCGAC CAGCAGACGC TGACGGATAT CGAAGAGTTC
CTGTTTGCGA CCTATGGCAA GGTGAAGATC TCACCGGAGG ATATCGAGGA GATTATCGCC
CTCACGCGGC AGGATAAAAA GAATAGAGGA AAAGAAATCA GGTTTTCATT GCTGAGTGGA
GCCGGGCAAT GTGCCTTTGA TGTAGTAGTA ACAGCGGCTG AAATGCGCAG ATCAATAGCT
TATTATTTGG GATAG
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| Protein sequence | MNQSVVIAPI SESLPDFLSS KQYSKIVVIA DNNTKRHCYP ILKAVLPKHS VVTVPSGEAH
KTLATCEKIW EAMTRDELDR HALVINVGGG VIGDMGGFCA AVYKRGIDFI QVPTTLLSQV
DASVGGKLGI DFQGFKNHLG VFNIPNSVLI DPVFLQTLPE REIRSGFAEI IKHCLIADGV
KWQEIRAKDF ERQNWPDLIA HSVQIKQQVV DQDPTEKGLR KILNFGHTLG HAVETCFLNK
SPKERLFHGE AIAVGMIMEA YLSFERKMID QQTLTDIEEF LFATYGKVKI SPEDIEEIIA
LTRQDKKNRG KEIRFSLLSG AGQCAFDVVV TAAEMRRSIA YYLG
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