Gene Dfer_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3564 
Symbol 
ID8227149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4357554 
End bp4358423 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID644931399 
Producthypothetical protein 
Protein accessionYP_003087937 
Protein GI255037316 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA AACACATCCT GATCGCCGAC AGCGGCTCCA CCAAAACCGA CTGGGCATTG 
GTGGATACAC GAAGCGGCAA TTATCAAACG GTTCAATCTG CGGGCATCAA TCCGTTTTAC
CAAACCGCGG AAGAAATCAT CCCCGTGCTG CAAAGCCAGG TGCTGCCGGA CGTGGAAGGT
GATATCCCGG AAATCCATTT TTACGGCGCC GGCTGTGCGG ACGAAAAAAC CGGGATGCCC
GTCACGAATG CATTGAAACA CTGTTTCCCC TCGGCCGATG TTGTGGAAGT GGCCTCGGAC
ATGCTTGGTG CGGCGCGCGG GCTGTGCGGC CATGCGCCCG GGCTCGCATG CATATTAGGT
ACGGGCGCGA ACAATGCGCT TTTCGATGGC AACCGCATTA CGCATTCCAT CGGCTCGCTG
GGCTTCTGGC TGGGCGACGA AGGCAGTGGC TCCTATCTGG GTAAAACGCT GGTGGTGCAT
TACCTGCAAA ACGAGCTGCC CGAAGACCTG CACGAGCGCT TCATAAGCCA GTATCCGGGC
CTCGATCGCC TTACCGTGCT CGATCATGCC TATAAAAAAC CTTACCCGAA CCGCTACTTC
GCTGCCTATT CGAAATTCAT CGCCGAACAT CGCGACCATA GTTTTATCCA GGCGCTGCTG
AGCAATGCGT TCGGGTTATT TGTGCAAAAA TATGTGTTAA AACACGCGAA TGCGGCCGGA
TATCCCGTCC ATTTCACTGG GTCGGTTGCG TATTATTATC AGGATGTCCT CCAAAAAGTG
CTTCAAAATC ACGGTTTGCA AATGGGCCGC ATCCTGAAAT CGCCACTGGA AGGGTTGGTC
GGTTACCATC TGCCCGATTT GAAAGTTTAA
 
Protein sequence
MASKHILIAD SGSTKTDWAL VDTRSGNYQT VQSAGINPFY QTAEEIIPVL QSQVLPDVEG 
DIPEIHFYGA GCADEKTGMP VTNALKHCFP SADVVEVASD MLGAARGLCG HAPGLACILG
TGANNALFDG NRITHSIGSL GFWLGDEGSG SYLGKTLVVH YLQNELPEDL HERFISQYPG
LDRLTVLDHA YKKPYPNRYF AAYSKFIAEH RDHSFIQALL SNAFGLFVQK YVLKHANAAG
YPVHFTGSVA YYYQDVLQKV LQNHGLQMGR ILKSPLEGLV GYHLPDLKV