| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3557 |
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| Symbol | |
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| ID | 8227142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4351888 |
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| End bp | 4352508 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644931392 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003087930 |
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| Protein GI | 255037309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.66103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATTA CCCTCATTTT AGTGATCATT ACTTCCGGGA TCAGCTATTA TGCCTTCAAT
AATTACAGTT TGATGGATAA GCTCATCCTG AACCCTTACC GCGTGACGCA ACGCAATGAA
TATTACCGCT TTATCACGTC AGGCTTCGTG CATGCCGATT TCGGTCACCT CATATTTAAT
ATGCTGAGCT TGTGGTTTGT GGGCGAAAGC ATCGAGCGTC TCTTCGCGAT GCTGTTCGGT
TCGAGCGGTA CATTTTATTA CCTGTTCTTA TACCTGGTGG GCATTGTCGT GTCGGACATT
CCGACGTTTC TGAAACACCG GAAAAACTCG CGTTACAATT CGCTGGGGGC TTCGGGGGGC
GTTTCGGCGG TGCTTTTCGC GGCGATCCTT TTTGCGCCGC TGATGCAGAT CTGCCTTTAT
TTCTTCATTT GTATGCCCGG TTTCATATTC GGCTTGCTGT TCCTCGGCTA TTCATTTTAC
GAGGCGAGGC GCGGTACGAG CTATGTCAAC CATAGCGCGC ACATGTACGG GGCTATTTTC
GGGATGGTTT TTATGGCCGT GGTGTATCCG GGCTCGGTAC CTAACTTTTT TCAGCAAATA
CTGAGTTGGC GGTTATTTTA A
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| Protein sequence | MSITLILVII TSGISYYAFN NYSLMDKLIL NPYRVTQRNE YYRFITSGFV HADFGHLIFN
MLSLWFVGES IERLFAMLFG SSGTFYYLFL YLVGIVVSDI PTFLKHRKNS RYNSLGASGG
VSAVLFAAIL FAPLMQICLY FFICMPGFIF GLLFLGYSFY EARRGTSYVN HSAHMYGAIF
GMVFMAVVYP GSVPNFFQQI LSWRLF
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