| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3532 |
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| Symbol | |
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| ID | 8227117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4313311 |
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| End bp | 4315044 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931367 |
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| Product | oligoendopeptidase, M3 family |
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| Protein accession | YP_003087905 |
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| Protein GI | 255037284 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02289] oligoendopeptidase, M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.387362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATC AGGAAACACT TCATATACCA ACCCGGGCGA AACGGCCTTT TATTGGGGAA
GAATTTGATT TGAAGAAATG GGAAGATGTG CAGCCTTTCT TCGAAAATTT GAAAAACAGG
GAGATCAATT CGCCCGAAGA CCTGAAACAG TGGTTCTCGG ACCGCAGCGA GATCGAATCC
TACCTTTCCG AGAACTTCGC ATGGCGCTAC ATCCGCCAGA CCTGCGATAC GGCCAACACC
GGCCTGATCA ATGCATTGCA GTTCTTTATC ACCGAAATCC AGCCGAAACT GGCCGAATAC
GGCAATGCGC TCGATAAAAA AGTGGTGGAT AACCCTTATC TGAGTGAATT GACGGAGCCT
GGCTTTGCGA TCACATTGCG TGGCATGAAG AAGGCAATCG AGATTTTCCG GGATGAAAAC
ATCCCGCTGA TCACCGACAT GCAGACCGAA GAGCGTAAAT ACGGCGCCAT CGCCGGCGCG
ATGACCGTCA CGCTCGATGG CGAGGAAATG ACGCTCCAGC GCGCAGCCGA CCGCCTGCAA
TCCACCGACC GGAATGTGCG CGAGGAAGCA TGGCGGGCCA TTGCCGAACG CCGTTACGAG
GATCGTGAGA AGCTGGATGA ACTGCTGAAC AAGCTGGTGA GCCTGCGCGA TAACGTGGGC
CGCAATGCCG GTTTCAGCAA CTACCGCGAC TACATGTTCG CCGCCATGGG CCGCTTCGAT
TACACGCCGC AGGATTGTTT CAACTTCCAC GGTTCTGTGA AAAAGTCAAT CGTGCCGATT
TTGAATGAAA TGGCTGCGGA ACGGAAGGCT GCATTGCAAC TGGACGCACT CCGCCCGTGG
GACACGAAAG TGGATCCGAA AGGCTTGCCG CCATTGAAAC CGTTCGAAAC CGGCGAGGAG
CTGCTCGACA AGACGATCCG CGCATTCTCG CGCCTAGACC CGTTCCTGGG CGACTGCCTG
CGGATTATGA AAACGATGAA GCACCTCGAC CTCGAATCGC GGAAGGGCAA GGCGCCGGGC
GGTTATAACT ACCCGCTCGA CGAAATCGGC GTGCCGTTTA TTTTCATGAA TGCGACGTCT
AACCTGCGCG ATATGGTTAC GCTCCTGCAC GAAGGCGGCC ATGCGGTGCA TTCGCTCGTA
ACGCGCGACC TGGCATTGAA TTCGTTCAAA CACACGCCTT CGGAGGTGGC CGAGCTGGCT
TCGATGTCGA TGGAGCTGAT CACGATGGAT TTCTGGGACG AGTTCTTTAC AAACGAGGAA
GACCTCAAAC GCGCGAAAAT CACACATCTG GAATCGATTA TCGAGACGTT ACCTTGGGTG
GCGACGGTGG ACAAGTTCCA GCATTGGATG TACGAAAACC CTCAGCACAC GCCGGAACAG
CGTACTGATG CGTGGGTGCG CATTTATGAG GAATTCACGG ATTCGGTCAT GGACTGGTCG
ACCTTGGAAA ACTTCAAAAA GTACCTCTGG CAGCGCCAGC TGCATATTTA TGAAGTGCCG
TTCTATTACA TCGAATACGG CATTGCGCAG CTCGGGGCAA TTGGCGTTTG GAAAAACTAC
CGCGAGAATC CGGCGGCCGG TTTGAAGGGT TACTTGGATG CATTGAAGCT TGGCTACACG
GCTACGATCG GTGAAATTTA CCAGGCGGCT AACATTCCGT TCGATTTCTC GGAGCGCCAT
ATCGCTGAAC TGATGCAGTT TGTACGCGAT GAATTGGCGG AATTAAAAAA ATAG
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| Protein sequence | MSNQETLHIP TRAKRPFIGE EFDLKKWEDV QPFFENLKNR EINSPEDLKQ WFSDRSEIES
YLSENFAWRY IRQTCDTANT GLINALQFFI TEIQPKLAEY GNALDKKVVD NPYLSELTEP
GFAITLRGMK KAIEIFRDEN IPLITDMQTE ERKYGAIAGA MTVTLDGEEM TLQRAADRLQ
STDRNVREEA WRAIAERRYE DREKLDELLN KLVSLRDNVG RNAGFSNYRD YMFAAMGRFD
YTPQDCFNFH GSVKKSIVPI LNEMAAERKA ALQLDALRPW DTKVDPKGLP PLKPFETGEE
LLDKTIRAFS RLDPFLGDCL RIMKTMKHLD LESRKGKAPG GYNYPLDEIG VPFIFMNATS
NLRDMVTLLH EGGHAVHSLV TRDLALNSFK HTPSEVAELA SMSMELITMD FWDEFFTNEE
DLKRAKITHL ESIIETLPWV ATVDKFQHWM YENPQHTPEQ RTDAWVRIYE EFTDSVMDWS
TLENFKKYLW QRQLHIYEVP FYYIEYGIAQ LGAIGVWKNY RENPAAGLKG YLDALKLGYT
ATIGEIYQAA NIPFDFSERH IAELMQFVRD ELAELKK
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