| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3521 |
|---|
| Symbol | |
|---|
| ID | 8227106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4300544 |
|---|
| End bp | 4302688 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644931356 |
|---|
| Product | Peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_003087894 |
|---|
| Protein GI | 255037273 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.681178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.646105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG AAGTCGAAAG CGGTCAGAAC AATAAAAAAG CGCTGATCAA CCGGGCCCGT
CTGGTCGGCT GGTTGCTGTT CGTGCTGGCA ATCATGGTGT TTGTCAAGCT CATACGCGTT
CAATATTATG ATACATTTAA AGGCAAAACC TGGGCCGAGT ACTCAGAGAA AAACGACCTG
AAACTGGACA CGATCCCGGC GATGCGCGGC AATATTTACG CGAGCGATAA CAGCCTGCTG
GCGACGTCGC TGCCTTATTA TTATGTAGGG TTTGATACAA AAGTCGCCGA TTCGGCCTAC
TTCTATAACC ATATCGACGA GCTGGCGGCG CTTTTAGCCA AAAACTTCAA AGAAAACAGC
GCCGAAGGCT ACAAAAGCAA GATCATGCGC TACCGCGTGA GCAAGAGCAA GCGGTACCTG
CGCCTGAAAA GCAGGGAAAT CACACACCTC GAACGCGAAC GGCTCAAAAA GTGGCCGTTT
TTTGCCAAAG ACCGGAAAGG CGGTGGCGGC AAATTCGAGA CGATCTACAA GCGCTACAAG
CCATTCAGCC CCATGGCCGA CCGGACCATC GGCGGCATTG ACCCCAAAAG CGGTCGCGGC
TACATTGGTC TCGAAGCCAG TTTCGACAAG CAGCTCGAAG GCCGGCCGGG AATTGGCTGG
GTCGAAAAAG TGGAAGGCGG GCTGAAAATC CCGGTTGGGG ATGCATTTAA TGTACAACCA
GAAGCCGGAC GCGACATTTA CACCACGCTC GACATGAACT ACCAGGAGCG CACCGAGATC
GCATTGCGCC GGAAACTGCT CGAAATGGAC GCGGATTTCG GTTCGGTGAT CATTATGGAA
GTGGCTACCG GGGAAATCAA AGCAATGGCG AACCTTACCA AGCGCGGACC GGGCAAGTAT
GAGGAGGTGT TTAACTACGC ATTGGCTGGC AGCAACGACC CGGGGTCGAC GTTTAAGCTG
GCTACGATGA TGGCTTTGCT GGAAGAAACC AATATGGACC CCGACCAGGT GATGGTCAAC
ACGGGCAATG GCGCCATGAA ATTCCGCAAC CACACCATTC GCGACGCCCA CCGCGGCGGC
TTCGGTACGA TCACCGCCTC GCAAGTTTTG GAGAAATCGT CCAACATCGG CATCGTGCAG
CTCATGCAGC GCTATTTTGC CAATAAGCCG GACAAATATC TGGGTTATCT CAAACAATTT
CACCTCACGC AGCCAACGGG CATTCACATG AAGGGCGAAA AGCCGCCGCT GATCCGCGAC
CGTAAGTCGA AACAATGGAG CAGTTACTCG ATGTACTTCA TGGCGCACGG CTATGAAATG
CAGATGACGC CATTGCAAAC ACTCGCATTC TACAATGCCG TGGCCAACAA TGGCTACTGG
GTGCGGCCGA TGATCGTGCG TGAGATCCGC AATGCGGAGG AAATTGAGGA TAAAATCCCG
CCGTACGTAG AAGAAAAGCC GATAGCATCA CCCGAAACGA TCCGTAAAGT GAAGAAAATG
CTGGAAGGCG TGGTGAATGC AGGTTTGGCC AAAACCATCA AAAGTGATTT GTACCAAATC
GCGGGAAAAA CCGGTACCGC CCGGAAGCTG ATCAACGGAA TTTATACCGA AGGCAAAAAC
TACACTTCTT TTGCGGGTTA CTTCCCGGCC GAGAAGCCGA AATACAGCTG CATCGTGATC
ATCGATAACC CCAAAAGCAG CGGCGCGGAT TACACCCGTT ACGCAGGCAG CGTGGCCGCG
CCGGTTTTCA AGGAAGTGGC CGACCGCATT TATGCTTACG ACGTGGCCAT TCAGAAGCCG
GTGAAAGACT CTATCCCCGA AAAATCGGAA GACGTGAAAT GGGCCGGCAC CATCAGCGAC
CTGAACGCGA TCAGCAAAAC ACTGAACATG ACACCCGCGC CGGCCGACAG CGAATACGCG
ACGGCATCGC TCTACAAAAA GGGCAAAACC AAATGGAACC CGCGCGAGGT AGATTCCCGC
GATGTGCCCG ATTTGCAAGG CATGTCGATG CGCGATGCAT TGTATCTGAT GGAAAACAAG
GGTTTCAGGG TGACGTTCAG AGGCTCGGGC AAGGTGATCG AGCAATCGCT GCCGCCGGGC
ACCAACAAAT CGGGAAGCAA GACAATCCTG CTTACATTAC AATAA
|
|---|
| Protein sequence | MKNEVESGQN NKKALINRAR LVGWLLFVLA IMVFVKLIRV QYYDTFKGKT WAEYSEKNDL
KLDTIPAMRG NIYASDNSLL ATSLPYYYVG FDTKVADSAY FYNHIDELAA LLAKNFKENS
AEGYKSKIMR YRVSKSKRYL RLKSREITHL ERERLKKWPF FAKDRKGGGG KFETIYKRYK
PFSPMADRTI GGIDPKSGRG YIGLEASFDK QLEGRPGIGW VEKVEGGLKI PVGDAFNVQP
EAGRDIYTTL DMNYQERTEI ALRRKLLEMD ADFGSVIIME VATGEIKAMA NLTKRGPGKY
EEVFNYALAG SNDPGSTFKL ATMMALLEET NMDPDQVMVN TGNGAMKFRN HTIRDAHRGG
FGTITASQVL EKSSNIGIVQ LMQRYFANKP DKYLGYLKQF HLTQPTGIHM KGEKPPLIRD
RKSKQWSSYS MYFMAHGYEM QMTPLQTLAF YNAVANNGYW VRPMIVREIR NAEEIEDKIP
PYVEEKPIAS PETIRKVKKM LEGVVNAGLA KTIKSDLYQI AGKTGTARKL INGIYTEGKN
YTSFAGYFPA EKPKYSCIVI IDNPKSSGAD YTRYAGSVAA PVFKEVADRI YAYDVAIQKP
VKDSIPEKSE DVKWAGTISD LNAISKTLNM TPAPADSEYA TASLYKKGKT KWNPREVDSR
DVPDLQGMSM RDALYLMENK GFRVTFRGSG KVIEQSLPPG TNKSGSKTIL LTLQ
|
|---|
| |