| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3517 |
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| Symbol | |
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| ID | 8227102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4295355 |
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| End bp | 4297292 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931352 |
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| Product | putative O-antigen related protein |
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| Protein accession | YP_003087890 |
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| Protein GI | 255037269 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0419564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA AAAGCATTGC ATGGCTTCTG ATGGCTGTAA TTACGCTGTC AGCGCACTAT
ATTTCCGCTC AAACGCCTGA GAAGACAACC CAATGGAAGA GTTTTGAAAA GACAGAATTC
ACATTCCAGG ACCGTGCGGC GTGGTATGTG AAACCGCACA AAGCAATTGA GGGCAATCCG
TGGATTTGGC GGGCACATTT CCCCACATGG CACACCGAAA TGGACAGTAT TTTGCTTTCG
CGCGGCTTCC ACATAGCTTA TGTGAACACC AATGATATGT TCGCCCACCC GAAAGCCATG
CAGGTTTGGG ACGCGTTTTA TGATTACCTC GTGAGAGAAA AGCATTTCGC CCCCAAAGTG
GCGCTCGAAG GTGTAAGTCG CGGCGGCCTG TATGTGTACG GATGGGCCAA GCGCAATCCC
GACAAGGTGA GCTGTATTTA CGCCGAAGCG CCCGTAGCCG ACCCGAAGAG CTGGCCTGGC
GGCAAAGGAA AGGGCAAAGG CTCACCCAAA GACTGGGAAG CGTGGAAGCA GATTTTCGGC
CTCACCGAAG AACAAGCCGC CAACTTCACC GACATTCCAT TGAACGACCT GGCTGGCCTG
GCCGCATTTA AAGTGCCCAT TGTGCATGTG ATTGGTTTGA AAGACGAACA CGTCCCCGCC
GCGGAAAATA CCGACTTACT GGTCAAAAAC TATATTGCAT TAGGCGGTCC CGCGAGCGTG
TACCCGATGA CGCGCGGCGA GCAGAGTATG GAAGGCCACC ATTTCCCGAT CGAGCATCCA
AAATTCTTCG CCAATTTCGT CGAACAGCAT AGCGTGCCGG TGCAAAAGCC GCTGCTGCAC
ACGCCCTACA TTACATTGAA TAAGGGACTG GGCAATGCAT TCGAAAAATT CAGAACAACT
AAGAAAGGCA CTGTCGCATT CCTCGGTGGC TCCATTACGC ACAACCCAGG CTGGCGCGAC
AAAACGTCGC AATATCTACG CGAGCATTTC CCCGATACCG AATTCACATT CATCGCGGCC
GGCATCCCAT CGCTCGGCAG CACGCCGCAT TCAATGCGTT TTGGCCGTGA TGTCCTCGCC
AAAGGCACGC CCGACCTGCT TTTTGTGGAG GCGGCCGTTA ACGACAGGGG TAATGGTTTC
AGCGAAAAGG CGCAAATCAG GGCGCTGGAT GGTATTTTGA GGCAAATGTA TGCGGTAAAT
CCAAAGGCAA ATGTGGTCAT GATGGCCTTT GCGGAACCTA AAAAGAATGA TGACTATGAC
GCAGGCAAAG AGCCCGCCGA AGTGGCCGTG CACGAGCGCG TGGCGAAGCA TTACGGGGCG
GTTTACATTA ACCTGGCCCG CGAAGTGTAC GACCGCATCA AGGCCGGGGA ATTCAGCTGG
AAGTACGATT TCAAAGACCT GCACCCATCG CCCTTTGGTC AGGAAATCTA CGTGCAAACG
ATCAAGGAAA TGCTGAAAAT GGAATCCGCC GCGACCGGAG ACATGAAGTT CCCCGCGCCG
ATGGATCGTT TCACCTACGA TAAAGGCAGT TACCACAAGC TCGAAGAGGC CAAAAACCTG
AAAGGCTTCA CGCTCGACCC GGATTGGAAG CCGAAGGTAA AATTCTCCAC CCGCGACGGC
TTTGTGAATG TGCCGATGCT CGTCAGCGAA ACAGCAGGCT CTTCGCTGGA TTTTGAATTC
AATGGCCGCG GTGTAGGCAT CGCCACCATC TCCGGCCCGG ATGCGGGAAA AATCACTTAC
ACGATCGATG GAAAGAACCG TAAAACGCTG GACACTTACA CTACTTGGAG CAACCAGCTG
CATTTGCCCT GGTATTTAAT GCTGGCGGAT GAGCTACCGG CGGGAAAGCA CAAGCTGCAT
TTGGAAATTT CAGGGGAAAA GAATGAGAAG AGTGAAGGCA ATGCATTAAG GGTTGTGCAT
TTGCTTGTGA ATGAGTAA
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| Protein sequence | MKTKSIAWLL MAVITLSAHY ISAQTPEKTT QWKSFEKTEF TFQDRAAWYV KPHKAIEGNP
WIWRAHFPTW HTEMDSILLS RGFHIAYVNT NDMFAHPKAM QVWDAFYDYL VREKHFAPKV
ALEGVSRGGL YVYGWAKRNP DKVSCIYAEA PVADPKSWPG GKGKGKGSPK DWEAWKQIFG
LTEEQAANFT DIPLNDLAGL AAFKVPIVHV IGLKDEHVPA AENTDLLVKN YIALGGPASV
YPMTRGEQSM EGHHFPIEHP KFFANFVEQH SVPVQKPLLH TPYITLNKGL GNAFEKFRTT
KKGTVAFLGG SITHNPGWRD KTSQYLREHF PDTEFTFIAA GIPSLGSTPH SMRFGRDVLA
KGTPDLLFVE AAVNDRGNGF SEKAQIRALD GILRQMYAVN PKANVVMMAF AEPKKNDDYD
AGKEPAEVAV HERVAKHYGA VYINLAREVY DRIKAGEFSW KYDFKDLHPS PFGQEIYVQT
IKEMLKMESA ATGDMKFPAP MDRFTYDKGS YHKLEEAKNL KGFTLDPDWK PKVKFSTRDG
FVNVPMLVSE TAGSSLDFEF NGRGVGIATI SGPDAGKITY TIDGKNRKTL DTYTTWSNQL
HLPWYLMLAD ELPAGKHKLH LEISGEKNEK SEGNALRVVH LLVNE
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