| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3468 |
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| Symbol | |
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| ID | 8227052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4243630 |
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| End bp | 4244523 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931304 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_003087843 |
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| Protein GI | 255037222 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0682574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCAG TAGAGGAAAG CGTAAGCGGG GTTGGGAAGA TCAGAGAGAG ATTAGGAGTT
TTATTTGAAC TGTTGAAGTT CCGGTTGGCG TCGTTGATCG CATTCTCCGG AGCAATGGGA
TATTGCCTTG GTTCGCGGGA TGTGAAAACC GGTGATCTCG TGCTTTTTAT CCTTGCATCT
ATCGGTATCA CCGGTGCTGC GAATATTATC AACCAGATTC TTGAAAAAGA CCTGGACAAA
ATGATGAAAA GAACGGCTTC ACGGCCGTTG CCAAGCGGAA GAATCACCAT TGAGCAGGCT
GCCACATGGG CGGTGATCCT CGGCGTATCG TCGTTGGTGA TATTTGTAAT GGTTTTTAAC
CTGACAACAG GACTTATTTC CCTGCTGTCA CTCGTGCTTT ACGGGTTTGT TTACACCCCG
TTGAAGCGCG TCGGTCCCAT AGCCGTGTTC GTGGGGGCAT TCCCCGGGGC ATTCCCTCCG
ATGATCGGCT GGGTGGCCGC AACGAACCAT TTCGGCCTGG AACCGGGTAT TTTGTTCGCG
ATCCAGTTCT TCTGGCAATT CCCGCATTTC TGGGCCATTG CCTGGGTTTT GGATGAAGAT
TACAAGAGAG CAGGTTTCAA ATTGTTGCCC GCCAATGGTT TGAAAGACTC TGATACGACA
TTGCAGATCA TGATCTATAC ATTGTTCCTG CTTCCGATCG GCTGGCTGCC GTACGAATTG
GGGATGACGG GCATCAATTC CGCATTCATC GCGACGATTT TCGGGGTGTT GTTCCTCGCG
CAGACGTTCC ACCTGATGCG CAAATGCACG GACAAAACCG CGAAGCAGCT TATGTTCGGA
TCGTTCATTT ACCTGCCCAT CGTACAGATT GCTTTTTTGT TGGATAAATT GTGA
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| Protein sequence | MISVEESVSG VGKIRERLGV LFELLKFRLA SLIAFSGAMG YCLGSRDVKT GDLVLFILAS
IGITGAANII NQILEKDLDK MMKRTASRPL PSGRITIEQA ATWAVILGVS SLVIFVMVFN
LTTGLISLLS LVLYGFVYTP LKRVGPIAVF VGAFPGAFPP MIGWVAATNH FGLEPGILFA
IQFFWQFPHF WAIAWVLDED YKRAGFKLLP ANGLKDSDTT LQIMIYTLFL LPIGWLPYEL
GMTGINSAFI ATIFGVLFLA QTFHLMRKCT DKTAKQLMFG SFIYLPIVQI AFLLDKL
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