Gene Dfer_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3466 
Symbol 
ID8227050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4242238 
End bp4243008 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content49% 
IMG OID644931302 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003087841 
Protein GI255037220 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0380593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAC ATGTAACAAC ACCCGGCGCG GTAGAACCCA AAATGTGGTT GGGGGGTATT 
GAGCCTATGA AAGCAAGTTA CGGTAAACTG ATGATGTGGT TCTTCCTCAT TTCGGATACC
TTTACTTTCT CTGCCTTGCT GGTGGCATAC GGTACAGCCC GGTTCAGTTT CCCCGCATTC
ACCGGAAAAC ACGAAGATTT TACCTTCTCC AACATGTACT GGCCGGTACC TGAAAGGGTT
TACGAAGCCG TACCATTCCT GCACGGTGTT TCGCTGCCGC TGGTATTCGT TGGTATCATG
ACATTCATCC TCATCGCGAG CTCCGTAACA ATGGTACTTG CAGTAGAGGC CGGTCACCGC
ATGGACCGCG CGAATGTTGA AAAATATATG CTCTGGACAA TCCTAGGCGG TTTTACCTTC
CTCGGTTGCC AGGCCTGGGA ATGGGGTCAC TTCATCCACG GAACCGATGC CGGTACTGTA
ATGAAAGTGA TCGAAAACGG TACATGGGTT GAGAAAACGA TCCACGGTGC AAACTTGACG
GAAAACCAGT ACGGTCCTCC TGCATTTGCG GATTTCTTCT TCTTCATCAC AGGTTTCCAC
GGAACTCACG TATTCTCAGG TGTGATCCTG AACATCCTGA TCTTCTTCCG CGCAGCCACG
GGTTTGTACG ACAGAAGAGG AAGCTACGAA ATGGTGGAGA AAGTAGGTCT CTACTGGCAC
TTTGTGGATC TGGTTTGGGT GTTTGTATTT ACATTCTTCT ACCTGGTTTA A
 
Protein sequence
MAAHVTTPGA VEPKMWLGGI EPMKASYGKL MMWFFLISDT FTFSALLVAY GTARFSFPAF 
TGKHEDFTFS NMYWPVPERV YEAVPFLHGV SLPLVFVGIM TFILIASSVT MVLAVEAGHR
MDRANVEKYM LWTILGGFTF LGCQAWEWGH FIHGTDAGTV MKVIENGTWV EKTIHGANLT
ENQYGPPAFA DFFFFITGFH GTHVFSGVIL NILIFFRAAT GLYDRRGSYE MVEKVGLYWH
FVDLVWVFVF TFFYLV