Gene Dfer_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3463 
Symbol 
ID8227047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4240720 
End bp4241259 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID644931299 
Productprotein of unknown function DUF420 
Protein accessionYP_003087838 
Protein GI255037217 
COG category[S] Function unknown 
COG ID[COG2322] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0174815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAT TAACAATCGA AAGAAAACCA AAATACGAAC GTATTATCAA TGTCCTGGCG 
ATCGTCATTC CGGTGGTGGT GGCATTACTG CTGGGTATCC GGCAGAAAAT CGACCTTGGC
GAATGGACGA AAACGCTGCC GCATGTGATC GGGGTAATTA ATACCCTCAC ATCCATGCTG
CTGATCATGG GCTTTTATTT TATCAAACAG CGGAACATTT CTGCGCACCG CCAGGCTATG
ACGGGCGCAT TCCTGCTCGG CGCGGTGTTC CTAGTTTGCT ATGTACTTTA TCACATTTCA
AACGAGGCGA CGAAGTTTGG CGGAACGGGC TTTGTTCGCC CGCTATATTA CTTTTTGTTG
ATCTCGCATA TCGTGTTGTC GATCGGGGTC GTTTGGTTTG TATTGCGTGC GGTGTATTTT
GGTTATACCA ACCGGATCGC CGAACACCGG AAGGCCGTAA AATGGGCAAT GCCGATCTGG
CTGTATGTGA GTGTTACCGG TGTGATCGTT TATTTGATGA TTAGTCCTTA TTACGTATGA
 
Protein sequence
MATLTIERKP KYERIINVLA IVIPVVVALL LGIRQKIDLG EWTKTLPHVI GVINTLTSML 
LIMGFYFIKQ RNISAHRQAM TGAFLLGAVF LVCYVLYHIS NEATKFGGTG FVRPLYYFLL
ISHIVLSIGV VWFVLRAVYF GYTNRIAEHR KAVKWAMPIW LYVSVTGVIV YLMISPYYV